Factsheet for Zm00001d002969_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025891_P001	Maize	mitochondrion	94.59	94.23
KXG26753	Sorghum	plastid	96.53	83.33
Os04t0525600-01	Rice	mitochondrion	93.05	77.99
GSMUA_AchrUn_...	Banana	cytosol	59.85	76.35
TraesCS2B01G393400.1	Wheat	plastid	85.33	74.66
TraesCS2D01G372600.1	Wheat	plastid	84.94	73.33
CDX69964	Canola	plastid	40.93	70.67
Zm00001d017330_P001	Maize	plastid	74.52	68.44
CDY61915	Canola	mitochondrion	62.16	68.22
Zm00001d051203_P001	Maize	plastid	79.15	67.43
AT5G23140.1	Thale cress	mitochondrion, plastid	61.78	66.39
VIT_01s0011g02100.t01	Wine grape	mitochondrion	61.78	66.39
Bra009331.1-P	Field mustard	mitochondrion	61.0	66.39
KRH29139	Soybean	mitochondrion, nucleus	61.0	66.39
Bra013020.1-P	Field mustard	mitochondrion	60.23	66.38
HORVU2Hr1G090470.1	Barley	plastid	86.49	66.27
CDY02210	Canola	mitochondrion	59.85	65.96
KRH24178	Soybean	mitochondrion	59.85	65.68
CDY21523	Canola	mitochondrion	60.23	65.55
Solyc04g009310.2.1	Tomato	plastid	59.07	64.83
PGSC0003DMT400082481	Potato	mitochondrion	59.07	64.83
PGSC0003DMT400027435	Potato	mitochondrion	57.92	63.03
GSMUA_Achr5P10890_001	Banana	plastid	61.78	59.93
Zm00001d047634_P002	Maize	cytosol	39.38	43.22
Zm00001d028895_P001	Maize	plastid	40.15	33.23
Zm00001d030149_P001	Maize	mitochondrion	35.52	28.93
GRMZM5G804708_P01	Maize	plastid	23.94	28.7
Zm00001d040322_P002	Maize	plastid	31.66	28.37
Zm00001d009339_P001	Maize	plastid	33.59	28.06
Zm00001d029121_P005	Maize	plastid	32.43	24.78
Zm00001d045430_P002	Maize	plastid	27.8	22.22
Zm00001d039167_P001	Maize	plastid	25.48	17.01

Protein Annotations

EntrezGene:100284211	Gene3D:3.90.226.10	MapMan:35.1	EMBL:BT067199	UniProt:C0PFY0	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	ProteinID:ONM15822.1	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	MEROPS:S14.A02	SUPFAM:SSF52096
UniParc:UPI000195CB95	EnsemblPlantsGene:Zm00001d002969	EnsemblPlants:Zm00001d002969_P001	EnsemblPlants:Zm00001d002969_T001	SEG:seg	:

Description

ATP-dependent Clp protease proteolytic subunit 2 mitochondrial

Coordinates

chr2:-:28312353..28313132

Molecular Weight (calculated)

27765.2 Da

IEP (calculated)

6.602

GRAVY (calculated)

-0.130

Length

259 amino acids

Sequence
(BLAST)

001: MLRRLAAVAQ RTFSSSSPHA PPLAASGYTP RREYGLVPMV IEHTSRGERA YDIFSRLLKE RIVCIHGPIT DDTASLVVAQ LLFLESENPA KPVHLYINSP
101: GGVVTAGLAI YDTMQYIRSP VTTLCIGQAA SMASLLLAAG ASGERRALPN ARVMIHQPSG GASGQASDIA IHAKEILKVR DRLNKIYAKH TGQAIDRIEQ
201: CMERDMFMDP EEAHDWGLID EVIEHRPVSL VSDAVGSDSQ NLGGGGAGVN KGADEPSSA

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.