Factsheet for Zm00001d040322_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00561	Sorghum	plastid	97.23	96.56
TraesCS3B01G216800.1	Wheat	plastid	84.08	85.26
TraesCS3A01G187300.1	Wheat	plastid	83.74	84.91
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	86.85	84.23
HORVU3Hr1G038610.4	Barley	plastid	80.62	82.04
CDY71709	Canola	endoplasmic reticulum, extracellular	52.25	79.06
TraesCS3D01G191100.2	Wheat	plastid	84.08	77.64
VIT_00s0204g00220.t01	Wine grape	plastid	64.71	64.04
KRH04225	Soybean	plastid	66.44	63.16
CDY42955	Canola	plastid	65.4	61.97
KRH57519	Soybean	plastid	65.05	61.84
Bra040108.1-P	Field mustard	plastid	65.05	61.64
CDY09652	Canola	plastid	64.71	61.51
CDY09656	Canola	plastid	64.71	61.11
CDY35605	Canola	plastid	64.01	61.06
CDX90492	Canola	plastid	64.71	60.91
AT4G17040.1	Thale cress	plastid	64.01	60.66
Bra012683.1-P	Field mustard	plastid	64.36	60.59
VIT_00s0309g00040.t01	Wine grape	endoplasmic reticulum	32.87	59.75
PGSC0003DMT400067452	Potato	plastid	61.94	59.27
Solyc08g077890.2.1	Tomato	plastid	61.59	58.94
VIT_00s0309g00080.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	34.26	58.58
GSMUA_Achr8P14970_001	Banana	mitochondrion	46.37	54.69
CDY43468	Canola	plastid	25.95	42.61
Zm00001d002969_P001	Maize	mitochondrion	28.37	31.66
Zm00001d025891_P001	Maize	mitochondrion	28.03	31.15
Zm00001d029121_P005	Maize	plastid	35.99	30.68
Zm00001d047634_P002	Maize	cytosol	24.91	30.51
Zm00001d017330_P001	Maize	plastid	28.37	29.08
Zm00001d051203_P001	Maize	plastid	28.37	26.97
Zm00001d009339_P001	Maize	plastid	26.64	24.84
Zm00001d028895_P001	Maize	plastid	26.3	24.28
GRMZM5G804708_P01	Maize	plastid	17.65	23.61
Zm00001d039167_P001	Maize	plastid	31.49	23.45
Zm00001d030149_P001	Maize	mitochondrion	24.22	22.01
Zm00001d045430_P002	Maize	plastid	23.18	20.68

Protein Annotations

EntrezGene:100272400	MapMan:19.4.2.9.2	Gene3D:3.90.226.10	UniProt:B4FNF5	EMBL:BT038643	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
ProteinID:ONM31166.1	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF25	MEROPS:S14.001
SUPFAM:SSF52096	UniParc:UPI00017B6C80	EnsemblPlantsGene:Zm00001d040322	EnsemblPlants:Zm00001d040322_P002	EnsemblPlants:Zm00001d040322_T002	SEG:seg

Description

ATP-dependent Clp protease proteolytic subunit

Coordinates

chr3:-:37997057..38010509

Molecular Weight (calculated)

31867.0 Da

IEP (calculated)

9.527

GRAVY (calculated)

-0.051

Length

289 amino acids

Sequence
(BLAST)

001: MEAAAAAFLS PPRVALDVRT LFSPPRCLPV SPSSQLRLAA RPRALAGAKP RFLSPHREPA VDGGRGARDV VAMVVPFLRG AAWEQPPPDL ASFLYKNRIV
101: YLGMCLVPSV TELMLAEFLY LQYDDAEKPI YMYINSTGTT KNGEKLGYET EALAVYDAMR YVKVPIFTLC VGNAWGEAAL LLAAGAKGNR AALPSSTIMI
201: KQPIGRFQGQ ATDVDIARKE IRNVKIEMVK LLARHIGKPM EEIARDIRRP KYFSPSEAVD YGIIDKVIYN EKIQEDGGVV SELKRSNLI

Best Arabidopsis Sequence Match ( AT4G17040.1 )
(BLAST)

001: MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI

Arabidopsis Description

CLPR4ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V785]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.