Factsheet for TraesCS3D01G191100.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G216800.1	Wheat	plastid	90.73	99.65
TraesCS3A01G187300.1	Wheat	plastid	90.42	99.3
HORVU3Hr1G038610.4	Barley	plastid	83.71	92.25
Zm00001d040322_P002	Maize	plastid	77.64	84.08
EES00561	Sorghum	plastid	77.64	83.51
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	75.72	79.53
CDY71709	Canola	endoplasmic reticulum, extracellular	47.6	78.01
VIT_00s0204g00220.t01	Wine grape	plastid	58.47	62.67
CDY42955	Canola	plastid	59.74	61.31
Bra040108.1-P	Field mustard	plastid	59.42	60.98
KRH04225	Soybean	plastid	59.11	60.86
KRH57519	Soybean	plastid	59.11	60.86
CDY09652	Canola	plastid	58.79	60.53
CDY35605	Canola	plastid	58.47	60.4
CDY09656	Canola	plastid	58.79	60.13
CDX90492	Canola	plastid	58.79	59.93
AT4G17040.1	Thale cress	plastid	58.15	59.67
Bra012683.1-P	Field mustard	plastid	58.47	59.61
PGSC0003DMT400067452	Potato	plastid	57.19	59.27
Solyc08g077890.2.1	Tomato	plastid	56.23	58.28
VIT_00s0309g00040.t01	Wine grape	endoplasmic reticulum	29.07	57.23
VIT_00s0309g00080.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	30.03	55.62
GSMUA_Achr8P14970_001	Banana	mitochondrion	43.13	55.1
CDY43468	Canola	plastid	24.6	43.75
TraesCS4D01G167900.1	Wheat	golgi, plastid	32.91	30.56
TraesCS6D01G214700.1	Wheat	plastid	26.2	27.7
TraesCS2D01G372600.1	Wheat	plastid	26.52	27.67
TraesCS4D01G184400.1	Wheat	plastid	23.32	25.89
TraesCS2D01G271200.1	Wheat	cytosol	15.65	24.75
TraesCS3D01G053300.1	Wheat	cytosol	16.93	24.54
TraesCS1D01G202100.1	Wheat	plastid	22.36	23.65
TraesCS1D01G435100.1	Wheat	cytosol	16.29	23.61
TraesCS1D01G445300.1	Wheat	plastid	29.07	23.39
TraesCS5D01G009400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	14.7	22.89
TraesCS1D01G182500.1	Wheat	cytosol, peroxisome, plastid	13.1	22.65
TraesCS4D01G157200.1	Wheat	plastid	19.17	22.56
TraesCS7D01G072100.1	Wheat	plastid	20.77	21.81

Protein Annotations

EnsemblPlants:TraesCS3D01G191100.2	EnsemblPlantsGene:TraesCS3D01G191100	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	PANTHER:PTHR10381	PANTHER:PTHR10381:SF25	PFAM:PF00574
PRINTS:PR00127	SEG:seg	SUPFAM:SSF52096	TIGR:cd07017	MapMan:19.4.2.9.2	:

Description

No Description!

Coordinates

chr3D:+:179911204..179916219

Molecular Weight (calculated)

34434.0 Da

IEP (calculated)

9.409

GRAVY (calculated)

-0.058

Length

313 amino acids

Sequence
(BLAST)

001: MEAVAALDAR ALFSPPTALP SSPSSRLRLA ARPRALAASP AFVAATPKQR FLTPHPDPAG GRGTRDVVAM VIPFLRGTAF EQPPPDLASF LYKNRIVYLG
101: MCLVPSVTEL MLAEFLYLQY EDAEKPIYMY INSTGTTKNG EKLGYETEAF AVYDAMRYVK IPIFTLCIGN AWGEAALLLA AGAKGNRAAL PSSTIMMKQP
201: IGRFQGQATD VDIARKEIRN VKIEMVKLLS RHIGKPMEEI ARDIRRPKYF SPSEAVDYGI IDKVRSCESH CEQKEPVLIA THRSNAIAIL QVLHNVKSQT
301: DAGLVSEVKK ELI

Best Arabidopsis Sequence Match ( AT4G17040.1 )
(BLAST)

001: MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI

Arabidopsis Description

CLPR4ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V785]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.