Factsheet for TraesCS7D01G072100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G076400.1	Wheat	plastid	100.0	99.33
HORVU7Hr1G017670.1	Barley	plastid	99.66	92.24
Os06t0136800-01	Rice	plastid	90.94	91.25
KXG19238	Sorghum	plastid	87.58	89.38
Zm00001d045430_P002	Maize	plastid	86.91	79.94
GSMUA_Achr1P08260_001	Banana	plastid	60.07	62.37
AT1G12410.1	Thale cress	plastid	55.03	58.78
VIT_02s0025g05140.t01	Wine grape	plastid	57.38	58.76
CDY68541	Canola	cytosol	24.5	58.4
PGSC0003DMT400010090	Potato	cytosol, plastid	56.38	58.13
Solyc08g079620.2.1	Tomato	plastid	56.04	57.79
CDY26563	Canola	plastid	53.69	57.55
Bra019764.1-P	Field mustard	plastid	53.69	57.35
CDX98066	Canola	plastid	53.69	57.35
CDY30078	Canola	plastid	53.36	56.99
KRH57313	Soybean	endoplasmic reticulum, extracellular	57.72	55.13
KRH04045	Soybean	mitochondrion	58.05	50.44
CDY69283	Canola	plastid	32.89	46.67
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.36	41.43
TraesCS1D01G435100.1	Wheat	cytosol	24.5	33.8
TraesCS3D01G053300.1	Wheat	cytosol	24.5	33.8
CDY15997	Canola	plastid	54.7	33.4
TraesCS1D01G182500.1	Wheat	cytosol, peroxisome, plastid	20.13	33.15
TraesCS5D01G009400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	20.13	29.85
TraesCS2D01G271200.1	Wheat	cytosol	19.8	29.8
TraesCS6D01G214700.1	Wheat	plastid	27.52	27.7
TraesCS4D01G184400.1	Wheat	plastid	25.5	26.95
TraesCS2D01G372600.1	Wheat	plastid	25.17	25.0
TraesCS1D01G202100.1	Wheat	plastid	23.83	23.99
TraesCS4D01G157200.1	Wheat	plastid	20.13	22.56
TraesCS3D01G191100.2	Wheat	plastid	21.81	20.77
TraesCS4D01G167900.1	Wheat	golgi, plastid	22.15	19.58
TraesCS1D01G445300.1	Wheat	plastid	23.83	18.25

Protein Annotations

MapMan:19.4.2.8.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009534	GO:GO:0009536
GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009840	GO:GO:0009941	GO:GO:0009987
GO:GO:0010287	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF15	SUPFAM:SSF52096	EnsemblPlantsGene:TraesCS7D01G072100	EnsemblPlants:TraesCS7D01G072100.1	TIGR:cd07017

Description

No Description!

Coordinates

chr7D:+:42495622..42498984

Molecular Weight (calculated)

32549.0 Da

IEP (calculated)

9.664

GRAVY (calculated)

-0.289

Length

298 amino acids

Sequence
(BLAST)

001: MALCRTAPAN SSCFHPRAVA SSPSSLSVGT KVFVGLKAQT RLGSSESSCP NVNARFYTAV NRRVSLGLSN KRATRARISM MPVGTPRVPY RTPGEGTWQW
101: LDIWNALYRE RIIFIGDTID EEFSNQVLAS MLYLDSVDDT KKILLYINGP GGDLTPCMAL YDTMLSLKSP IGTHCLGFAF NLAGFILAAG QKGSRTGMPL
201: CRVSLQSPAG AARGQADDIE NESNELNRIK NYLYGKLAEH TGHSVEKVHE DLSRSKRFDA EGALEYGIID RIVRPSRIKK EGGSTTGQKK ELRNLGLG

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.