Factsheet for Zm00001d045430_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19238	Sorghum	plastid	87.96	97.6
Os06t0136800-01	Rice	plastid	82.72	90.24
TraesCS7D01G072100.1	Wheat	plastid	79.94	86.91
TraesCS7A01G076400.1	Wheat	plastid	79.94	86.33
HORVU7Hr1G017670.1	Barley	plastid	80.25	80.75
TraesCS4A01G374600.2	Wheat	plastid	77.78	79.75
GSMUA_Achr1P08260_001	Banana	plastid	56.48	63.76
VIT_02s0025g05140.t01	Wine grape	plastid	54.63	60.82
CDY68541	Canola	cytosol	23.46	60.8
Solyc08g079620.2.1	Tomato	plastid	53.7	60.21
PGSC0003DMT400010090	Potato	cytosol, plastid	53.7	60.21
AT1G12410.1	Thale cress	plastid	51.23	59.5
Bra019764.1-P	Field mustard	plastid	50.62	58.78
CDX98066	Canola	plastid	50.62	58.78
CDY26563	Canola	plastid	50.31	58.63
CDY30078	Canola	plastid	50.31	58.42
KRH57313	Soybean	endoplasmic reticulum, extracellular	53.4	55.45
KRH04045	Soybean	mitochondrion	53.7	50.73
CDY69283	Canola	plastid	32.41	50.0
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.93	42.2
GRMZM5G804708_P01	Maize	plastid	22.84	34.26
CDY15997	Canola	plastid	50.93	33.81
Zm00001d047634_P002	Maize	cytosol	22.22	30.51
Zm00001d002969_P001	Maize	mitochondrion	22.22	27.8
Zm00001d025891_P001	Maize	mitochondrion	22.22	27.69
Zm00001d028895_P001	Maize	plastid	24.69	25.56
Zm00001d017330_P001	Maize	plastid	21.6	24.82
Zm00001d051203_P001	Maize	plastid	22.84	24.34
Zm00001d009339_P001	Maize	plastid	22.22	23.23
Zm00001d040322_P002	Maize	plastid	20.68	23.18
Zm00001d030149_P001	Maize	mitochondrion	21.6	22.01
Zm00001d029121_P005	Maize	plastid	19.14	18.29
Zm00001d039167_P001	Maize	plastid	21.3	17.78

Protein Annotations

MapMan:19.4.2.8.1	Gene3D:3.90.226.10	UniProt:A0A1D6NVW1	ProteinID:AQL02252.1	InterPro:ClpP	InterPro:ClpP/TepA
InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658
GO:GO:0009840	GO:GO:0009941	GO:GO:0009987	GO:GO:0010287	GO:GO:0016043	GO:GO:0016787
GO:GO:0019538	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF15	SUPFAM:SSF52096
UniParc:UPI0008436E7B	EnsemblPlantsGene:Zm00001d045430	EnsemblPlants:Zm00001d045430_P002	EnsemblPlants:Zm00001d045430_T002	:	:

Description

ATP-dependent Clp protease proteolytic subunit

Coordinates

chr9:-:21877799..21880928

Molecular Weight (calculated)

35445.6 Da

IEP (calculated)

9.587

GRAVY (calculated)

-0.238

Length

324 amino acids

Sequence
(BLAST)

001: MAAPASSSCF HPRATASPPS SLSVGTKVFV GLRAQTKLGS SESSCPNVSA GFHTAVNRRI SLSLMGFGTY MDAIVSSRFE EITRYVSSDS SGYSRLSKKK
101: ATRARISMMP IGTPRVPYRT PGEGTWQWLD IWNALYRERI IFIGDNIDEE FSNQVLASML YLDSIDNSKK IMLYINGPGG DLTPCMALYD TMLSLKSPIG
201: THCLGFAFNL AGFILAAGEK GSRTGMPLCR ISLQSPAGAA RGQADDIENE ANELIRIKNY LYGKLAGHTG HSVEKIHEDL SRVKRFDAEG ALEYGIIDRI
301: VRPSRIKKEG STAQRRDMRN LGLG

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.