Factsheet for TraesCS4A01G374600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G076400.1	Wheat	plastid	91.46	96.33
HORVU7Hr1G017670.1	Barley	plastid	90.51	88.82
Os06t0136800-01	Rice	plastid	82.59	87.88
KXG19238	Sorghum	plastid	80.38	86.99
Zm00001d045430_P002	Maize	plastid	79.75	77.78
GSMUA_Achr1P08260_001	Banana	plastid	55.7	61.32
CDY68541	Canola	cytosol	23.1	58.4
AT1G12410.1	Thale cress	plastid	50.95	57.71
VIT_02s0025g05140.t01	Wine grape	plastid	52.85	57.39
PGSC0003DMT400010090	Potato	cytosol, plastid	52.22	57.09
Solyc08g079620.2.1	Tomato	plastid	51.9	56.75
CDY26563	Canola	plastid	49.68	56.47
Bra019764.1-P	Field mustard	plastid	49.68	56.27
CDX98066	Canola	plastid	49.68	56.27
CDY30078	Canola	plastid	49.37	55.91
KRH57313	Soybean	endoplasmic reticulum, extracellular	52.85	53.53
KRH04045	Soybean	mitochondrion	53.16	48.98
CDY69283	Canola	plastid	30.06	45.24
TraesCS1A01G111400.1	Wheat	cytosol	15.19	42.11
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.32	40.66
CDY15997	Canola	plastid	50.32	32.58
TraesCS3A01G215600.1	Wheat	cytosol	16.14	27.72
TraesCS4A01G121500.1	Wheat	plastid	24.05	26.95
TraesCS6A01G220500.1	Wheat	plastid	25.32	26.67
TraesCS1A01G198400.1	Wheat	plastid	22.15	23.65
TraesCS3A01G187300.1	Wheat	plastid	20.57	22.81
TraesCS3A01G197900.1	Wheat	plastid	21.84	22.48
TraesCS4A01G149900.1	Wheat	plastid	18.99	21.66
TraesCS4A01G139700.3	Wheat	plastid	20.57	19.29
TraesCS1A01G437500.2	Wheat	plastid	21.84	17.83

Protein Annotations

EnsemblPlants:TraesCS4A01G374600.2	EnsemblPlantsGene:TraesCS4A01G374600	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	PANTHER:PTHR10381	PANTHER:PTHR10381:SF15	PFAM:PF00574	PRINTS:PR00127
SUPFAM:SSF52096	TIGR:cd07017	MapMan:19.4.2.8.1	:	:	:

Description

No Description!

Coordinates

chr4A:+:649202601..649206342

Molecular Weight (calculated)

34636.8 Da

IEP (calculated)

9.372

GRAVY (calculated)

-0.104

Length

316 amino acids

Sequence
(BLAST)

001: MALCRTAPAN SSCFHPRAVA SSPSSLSVGT KVFVGLKAQT RLGSSESSCP NVNARFYTAV NRRVSLGLSN KRATRARISM MPVGTPRVPY RTPGEGTWQW
101: LDIWNALYRE RIIFIGDTID EEFSNQVLAS MLYLDSVDDT KKILLYINGP GGDLTPCMAL YDTMLSLKSP IGTHCLGFAF NLAGFILAAG QKGSRTGMPL
201: CRVSLQSPAG AARGQVWADD IENESNELNR IKNYLYGKLA EHTGHSVEKV HEDLSRSKRF DAEGALEYGI IDRIVRPSRI KKEGGSTTGR VLVVACLQHA
301: NCKLIFSPYM QIIVVV

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.