Factsheet for Os06t0136800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19238	Sorghum	plastid	91.58	93.15
TraesCS7D01G072100.1	Wheat	plastid	91.25	90.94
TraesCS7A01G076400.1	Wheat	plastid	91.25	90.33
HORVU7Hr1G017670.1	Barley	plastid	91.25	84.16
Zm00001d045430_P002	Maize	plastid	90.24	82.72
TraesCS4A01G374600.2	Wheat	plastid	87.88	82.59
GSMUA_Achr1P08260_001	Banana	plastid	60.94	63.07
VIT_02s0025g05140.t01	Wine grape	plastid	59.93	61.17
CDY68541	Canola	cytosol	25.25	60.0
Solyc08g079620.2.1	Tomato	plastid	57.58	59.17
PGSC0003DMT400010090	Potato	cytosol, plastid	57.58	59.17
AT1G12410.1	Thale cress	plastid	55.22	58.78
Bra019764.1-P	Field mustard	plastid	54.55	58.06
CDX98066	Canola	plastid	54.55	58.06
CDY26563	Canola	plastid	54.21	57.91
CDY30078	Canola	plastid	54.21	57.71
KRH57313	Soybean	endoplasmic reticulum, extracellular	57.91	55.13
KRH04045	Soybean	mitochondrion	58.92	51.02
CDY69283	Canola	plastid	34.68	49.05
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.88	41.69
CDY15997	Canola	plastid	55.56	33.81
CAA33972	Rice	cytosol	24.58	33.8
Os03t0308100-01	Rice	plastid	27.27	28.72
Os02t0634500-01	Rice	plastid	27.61	27.52
Os04t0525600-01	Rice	mitochondrion	26.6	25.57
Os10t0580800-01	Rice	plastid	24.92	25.26
Os01t0507900-01	Rice	plastid	25.93	24.52
Os03t0411500-01	Rice	plastid	20.88	23.94
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	23.57	23.49
Os03t0344900-00	Rice	plastid	23.91	20.82
Os05t0592100-01	Rice	plastid	24.92	19.17

Protein Annotations

MapMan:19.4.2.8.1	Gene3D:3.90.226.10	EntrezGene:4340044	EMBL:AK061385	EMBL:AK099815	EMBL:AK104375
ProteinID:BAD68462.1	ProteinID:BAF18643.1	ProteinID:BAS96039.1	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
ProteinID:EEE65049.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658
GO:GO:0009840	GO:GO:0009941	GO:GO:0009987	GO:GO:0010287	GO:GO:0016043	GO:GO:0016787
GO:GO:0019538	HAMAP:MF_00444	EnsemblPlantsGene:Os06g0136800	EnsemblPlants:Os06t0136800-01	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF15	UniProt:Q5VQ13	SUPFAM:SSF52096	UniParc:UPI0000457E8E	RefSeq:XP_015641155.1
SEG:seg	:	:	:	:	:

Description

Clp protease 9, CLP PROTEASE 9Peptidase S14, ClpP family protein. (Os06t0136800-01)

Coordinates

chr6:+:1949464..1953284

Molecular Weight (calculated)

32225.8 Da

IEP (calculated)

9.497

GRAVY (calculated)

-0.185

Length

297 amino acids

Sequence
(BLAST)

001: MALSAAAPAN SSCFHPRAAA ASAPSSLSVG TKVFVGLKAQ TKLGSSESSC PNVTAGFYTA VNRRISLGLS NKRATRARIS MMPVGTPRVP YRTPGEGTWQ
101: WLDIWNALYR ERIIFIGDSI DEEFSNQVLA SMLYLDSVDN TKKILLYING PGGDLTPCMA LYDTMLSLKS PIGTHCLGFA FNLAGFILAA GEKGSRTGMP
201: LCRISLQSPA GAARGQADDI ENEANELIRI KNYLYSKLSE HTGHPVDKIH EDLSRVKRFD AEGALEYGII DRIIRPSRIK KEGSTAQKKD LRNLGLG

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.