Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12410.1 | KRG99108 | AT1G69690.1 | 21798944 |
| AT1G12410.1 | KRH45889 | AT1G69690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04045 | Soybean | mitochondrion | 92.63 | 84.26 |
| VIT_02s0025g05140.t01 | Wine grape | plastid | 68.91 | 73.88 |
| GSMUA_Achr1P08260_001 | Banana | plastid | 65.71 | 71.43 |
| Bra019764.1-P | Field mustard | plastid | 63.46 | 70.97 |
| CDY26563 | Canola | plastid | 63.14 | 70.86 |
| CDX98066 | Canola | plastid | 63.14 | 70.61 |
| CDY30078 | Canola | plastid | 62.82 | 70.25 |
| AT1G12410.1 | Thale cress | plastid | 62.82 | 70.25 |
| CDY68541 | Canola | cytosol | 27.56 | 68.8 |
| PGSC0003DMT400010090 | Potato | cytosol, plastid | 61.86 | 66.78 |
| Solyc08g079620.2.1 | Tomato | plastid | 61.22 | 66.09 |
| KXG19238 | Sorghum | plastid | 55.13 | 58.9 |
| Os06t0136800-01 | Rice | plastid | 55.13 | 57.91 |
| TraesCS7D01G072100.1 | Wheat | plastid | 55.13 | 57.72 |
| TraesCS7A01G076400.1 | Wheat | plastid | 55.13 | 57.33 |
| CDY69283 | Canola | plastid | 37.82 | 56.19 |
| HORVU7Hr1G017670.1 | Barley | plastid | 56.41 | 54.66 |
| Zm00001d045430_P002 | Maize | plastid | 55.45 | 53.4 |
| TraesCS4A01G374600.2 | Wheat | plastid | 53.53 | 52.85 |
| Bra026972.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 63.78 | 50.9 |
| CDY15997 | Canola | plastid | 63.14 | 40.37 |
| KRH29139 | Soybean | mitochondrion, nucleus | 23.72 | 31.09 |
| KRH24178 | Soybean | mitochondrion | 23.4 | 30.93 |
| KRH31786 | Soybean | nucleus, plastid | 28.85 | 29.7 |
| KRH69210 | Soybean | nucleus, plastid | 29.49 | 29.58 |
| KRH29491 | Soybean | plastid | 22.76 | 26.01 |
| KRH24490 | Soybean | plastid | 22.76 | 26.01 |
| KRH68271 | Soybean | plastid | 24.36 | 25.25 |
| KRH39679 | Soybean | nucleus, plastid | 24.36 | 24.84 |
| KRH57519 | Soybean | plastid | 24.04 | 24.67 |
| KRH76388 | Soybean | nucleus, plastid | 23.72 | 24.18 |
| KRH04225 | Soybean | plastid | 23.4 | 24.01 |
| KRH01676 | Soybean | plastid | 24.04 | 23.29 |
| KRH70450 | Soybean | plastid | 23.72 | 23.2 |
| KRH68514 | Soybean | plastid | 21.15 | 20.37 |
| KRG96809 | Soybean | plastid | 21.15 | 20.18 |
| KRH35674 | Soybean | plastid | 23.4 | 19.62 |
| KRG91103 | Soybean | plastid | 23.08 | 19.35 |
Protein Annotations
| EntrezGene:100800113 | MapMan:19.4.2.8.1 | Gene3D:3.90.226.10 | EMBL:ACUP02002825 | InterPro:ClpP | InterPro:ClpP/TepA |
| InterPro:ClpP/crotonase-like_dom_sf | EnsemblPlantsGene:GLYMA_05G053600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008236 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0016787 |
| GO:GO:0019538 | UniProt:I1K0I6 | EnsemblPlants:KRH57313 | ProteinID:KRH57313 | ProteinID:KRH57313.1 | HAMAP:MF_00444 |
| PFAM:PF00574 | PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF15 | MEROPS:S14.A01 | SUPFAM:SSF52096 |
| TMHMM:TMhelix | UniParc:UPI0002339701 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:4853939..4859077
Molecular Weight (calculated)
34542.6 Da
IEP (calculated)
9.446
GRAVY (calculated)
-0.181
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MFISLATSNS FRFWFLLPYP LSLLHFSMAV VPYTTGSAPL LSPPSTSSVA TKLYSGLKLQ AASPFGAAKP NVTAEFYGKV HNTLHCRYAN HNTSMARIRM
101: MPIGTPKVPY RTPGEGTWQW VDVWNALYRE RVIFIGQEID EEFSNQILAT MLYLDSIENS KKLYMYINGP GGDLTPSMAI YDTMQSLQSP VATHCVGYAY
201: SLAAFLLAAG EKGNRSAMPL SRVALTSPAG AARGQADDIQ NEANELLRIR DYLFNELAQK TGQPVEKITK DLSRMKRFNA QEALEYGLID RIVRPPRIKA
301: DAPRKEAGTG LG
101: MPIGTPKVPY RTPGEGTWQW VDVWNALYRE RVIFIGQEID EEFSNQILAT MLYLDSIENS KKLYMYINGP GGDLTPSMAI YDTMQSLQSP VATHCVGYAY
201: SLAAFLLAAG EKGNRSAMPL SRVALTSPAG AARGQADDIQ NEANELLRIR DYLFNELAQK TGQPVEKITK DLSRMKRFNA QEALEYGLID RIVRPPRIKA
301: DAPRKEAGTG LG
001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG
Arabidopsis Description
CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.