CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0136800-01	Rice	plastid	93.15	91.58
Zm00001d045430_P002	Maize	plastid	97.6	87.96
TraesCS7D01G072100.1	Wheat	plastid	89.38	87.58
TraesCS7A01G076400.1	Wheat	plastid	89.38	87.0
HORVU7Hr1G017670.1	Barley	plastid	89.73	81.37
TraesCS4A01G374600.2	Wheat	plastid	86.99	80.38
GSMUA_Achr1P08260_001	Banana	plastid	62.33	63.41
CDY68541	Canola	cytosol	26.03	60.8
VIT_02s0025g05140.t01	Wine grape	plastid	60.27	60.48
Solyc08g079620.2.1	Tomato	plastid	59.59	60.21
PGSC0003DMT400010090	Potato	cytosol, plastid	59.59	60.21
AT1G12410.1	Thale cress	plastid	56.85	59.5
Bra019764.1-P	Field mustard	plastid	56.16	58.78
CDX98066	Canola	plastid	56.16	58.78
CDY26563	Canola	plastid	55.82	58.63
CDY30078	Canola	plastid	55.82	58.42
KRH57313	Soybean	endoplasmic reticulum, extracellular	58.9	55.13
KRH04045	Soybean	mitochondrion	59.25	50.44
CDY69283	Canola	plastid	35.62	49.52
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.51	42.2
CDY15997	Canola	plastid	56.85	34.02
EER92371	Sorghum	plastid	27.4	28.27
OQU85365	Sorghum	plastid	26.37	24.92
KXG26753	Sorghum	plastid	25.34	24.67
EER94414	Sorghum	plastid	24.32	24.57
EES00782	Sorghum	plastid	25.34	23.64
EES00561	Sorghum	plastid	23.29	23.37
EES07709	Sorghum	plastid	19.86	21.01
OQU92609	Sorghum	plastid	21.58	18.58
EES20050	Sorghum	plastid	23.29	17.53

Protein Annotations

MapMan:19.4.2.8.1	Gene3D:3.90.226.10	UniProt:A0A194YH16	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009840	GO:GO:0009941
GO:GO:0009987	GO:GO:0010287	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	EnsemblPlants:KXG19238
ProteinID:KXG19238	ProteinID:KXG19238.1	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381
PANTHER:PTHR10381:SF15	EnsemblPlantsGene:SORBI_3010G027200	SUPFAM:SSF52096	UniParc:UPI0001C805D5	:	:

Description

hypothetical protein

Coordinates

chr10:+:2184867..2187643

Molecular Weight (calculated)

31994.5 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.236

Length

292 amino acids

Sequence
(BLAST)

001: MAAPANSSCF HPRATFSPPS SLSVGTKVFV GLRAQTKLGS SESSCPNVSA GFYTAVNRRI SLGLSSKKAT RARISMMPIG TPRVPYRTPG EGTWQWLDIW
101: NALYRERIIF IGDNIDEEFS NQVLASMLYL DSIDNSKKIM LYINGPGGDL TPCMALYDTM LSLKSPIGTH CLGFAFNLAG FILAAGEKGS RTGMPLCRIS
201: LQSPAGAARG QADDIENEAN ELIRIKNYLY GKLAEHTGHS VEKIHEDLSR VKRFDAEGAL EYGIIDRIIR PSRIKKEGST AQRRDMRNLG LG

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.