Factsheet for GSMUA_Achr1P08260_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g05140.t01	Wine grape	plastid	71.78	70.79
Bra019764.1-P	Field mustard	plastid	64.81	66.67
CDX98066	Canola	plastid	64.81	66.67
AT1G12410.1	Thale cress	plastid	64.11	65.95
CDY30078	Canola	plastid	64.11	65.95
CDY26563	Canola	plastid	63.76	65.83
KRH57313	Soybean	endoplasmic reticulum, extracellular	71.43	65.71
CDY68541	Canola	cytosol	28.57	65.6
PGSC0003DMT400010090	Potato	cytosol, plastid	64.46	64.01
Solyc08g079620.2.1	Tomato	plastid	63.41	62.98
KXG19238	Sorghum	plastid	63.41	62.33
Os06t0136800-01	Rice	plastid	63.07	60.94
TraesCS7D01G072100.1	Wheat	plastid	62.37	60.07
TraesCS7A01G076400.1	Wheat	plastid	62.37	59.67
KRH04045	Soybean	mitochondrion	70.03	58.6
Zm00001d045430_P002	Maize	plastid	63.76	56.48
TraesCS4A01G374600.2	Wheat	plastid	61.32	55.7
HORVU7Hr1G017670.1	Barley	plastid	62.37	55.59
CDY69283	Canola	plastid	37.28	50.95
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.02	45.52
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	10.1	42.65
CDY15997	Canola	plastid	63.76	37.5
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	15.33	33.85
GSMUA_AchrUn_...	Banana	cytosol	22.3	31.53
GSMUA_Achr5P10890_001	Banana	plastid	26.48	28.46
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	20.56	26.82
GSMUA_Achr8P05270_001	Banana	plastid	24.74	26.69
GSMUA_Achr8P22320_001	Banana	plastid	26.83	25.67
GSMUA_Achr8P14970_001	Banana	mitochondrion	21.25	24.9
GSMUA_Achr3P08150_001	Banana	plastid	25.78	21.96
GSMUA_Achr9P24480_001	Banana	plastid	24.39	21.02
GSMUA_Achr4P13550_001	Banana	plastid	25.09	19.51
GSMUA_Achr2P08390_001	Banana	plastid	26.83	19.35

Protein Annotations

MapMan:19.4.2.8.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009840
GO:GO:0009941	GO:GO:0009987	GO:GO:0010287	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G08260_001	EnsemblPlants:GSMUA_Achr1P08260_001	EnsemblPlants:GSMUA_Achr1T08260_001	UniProt:M0RY34	HAMAP:MF_00444	PFAM:PF00574
PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF15	SUPFAM:SSF52096	UniParc:UPI000294EDDB	:

Description

ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G08260_001]

Coordinates

chr1:-:6350229..6356252

Molecular Weight (calculated)

31776.4 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.314

Length

287 amino acids

Sequence
(BLAST)

001: MAVSLQSTSL RPLALDPKPS LSLTSKSFVG LKSQSSGAFG YGPPNVSAGF HCRVHQSLFL RHPTKRGSQG RIFMMPIGTP RVPYRTPGEG TWQWVDLWNA
101: LYRERVIFIG EHIDEEFCNQ VLATMLYLDS IESSKKMYLY INGPGGDLTP SMAIYDTMQS LKSPVATHCI GHAYNMAGFL LAAGEKGSRV GMPLCRVTLQ
201: PPAGAARGQA DDIRNEANEL LRIRDYLFGE LAKKTGQPVE KINKDLSYVK RFNAQEALEY GLIDRILRPA RIKADAPRKE TAQQGQA

Best Arabidopsis Sequence Match ( AT1G12410.1 )
(BLAST)

001: MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI
101: FIGQNIDEEF SNQILATMLY LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG HRFAMPLSRI ALQSPAGAAR
201: GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

Arabidopsis Description

CLPR2ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ36]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.