Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G044510.1 | Barley | extracellular | 50.0 | 39.08 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 38.24 | 20.0 |
| Zm00001d009339_P001 | Maize | plastid | 80.88 | 17.74 |
| EES00782 | Sorghum | plastid | 80.88 | 17.57 |
| HORVU3Hr1G044530.1 | Barley | plastid | 77.94 | 17.38 |
| TraesCS3A01G197900.1 | Wheat | plastid | 77.94 | 17.26 |
| TraesCS3B01G229600.1 | Wheat | plastid | 77.94 | 17.26 |
| Os01t0507900-01 | Rice | plastid | 79.41 | 17.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.0 | 16.75 |
| GSMUA_Achr4P13550_001 | Banana | plastid | 89.71 | 16.53 |
| GSMUA_Achr6P01290_001 | Banana | extracellular, peroxisome, plastid | 50.0 | 15.45 |
| GSMUA_Achr8P22320_001 | Banana | plastid | 57.35 | 13.0 |
| GSMUA_Achr5P10890_001 | Banana | plastid | 48.53 | 12.36 |
| GSMUA_Achr8P14970_001 | Banana | mitochondrion | 39.71 | 11.02 |
| GSMUA_Achr8P05270_001 | Banana | plastid | 41.18 | 10.53 |
| GSMUA_Achr1P08260_001 | Banana | plastid | 42.65 | 10.1 |
| GSMUA_Achr3P08150_001 | Banana | plastid | 41.18 | 8.31 |
| GSMUA_Achr9P24480_001 | Banana | plastid | 38.24 | 7.81 |
| GSMUA_Achr2P08390_001 | Banana | plastid | 38.24 | 6.53 |
Protein Annotations
| Gene3D:3.90.226.10 | MapMan:35.1 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr4G06560_001 | EnsemblPlants:GSMUA_Achr4P06560_001 |
| EnsemblPlants:GSMUA_Achr4T06560_001 | UniProt:M0SLM3 | PFAM:PF00574 | PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF20 |
| SUPFAM:SSF52096 | TMHMM:TMhelix | UniParc:UPI000295FB55 | : | : | : |
Description
ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G06560_001]
Coordinates
chr4:-:4952778..4953458
Molecular Weight (calculated)
7061.9 Da
IEP (calculated)
8.909
GRAVY (calculated)
0.297
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MDAEDQKKEI KLFINSPGGS VTAGMGIYDA MKLCKADVST VCLGLLASMG AFLLAAGTKG KKILHAKC
001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
Arabidopsis Description
CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.