Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P06560_001 | Banana | cytosol, plastid, vacuole | 39.08 | 50.0 |
| HORVU3Hr1G083440.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.03 | 35.06 |
| Os01t0507900-01 | Rice | plastid | 74.71 | 20.7 |
| HORVU3Hr1G044530.1 | Barley | plastid | 71.26 | 20.33 |
| TraesCS3B01G229600.1 | Wheat | plastid | 71.26 | 20.2 |
| TraesCS3A01G197900.1 | Wheat | plastid | 71.26 | 20.2 |
| Zm00001d009339_P001 | Maize | plastid | 70.11 | 19.68 |
| EES00782 | Sorghum | plastid | 70.11 | 19.49 |
| HORVU3Hr1G053800.1 | Barley | endoplasmic reticulum | 29.89 | 18.7 |
| AT1G66670.1 | Thale cress | plastid | 63.22 | 17.8 |
| Bra004177.1-P | Field mustard | plastid | 63.22 | 17.57 |
| CDX96137 | Canola | plastid | 63.22 | 17.57 |
| VIT_14s0006g01880.t01 | Wine grape | plastid | 64.37 | 17.5 |
| HORVU3Hr1G044750.2 | Barley | cytosol | 27.59 | 17.39 |
| KRH70450 | Soybean | plastid | 63.22 | 17.24 |
| KRH01676 | Soybean | plastid | 63.22 | 17.08 |
| CDY36212 | Canola | plastid | 60.92 | 16.93 |
| Solyc02g091280.2.1 | Tomato | plastid | 58.62 | 16.5 |
| PGSC0003DMT400078756 | Potato | plastid | 58.62 | 16.24 |
| HORVU4Hr1G053660.1 | Barley | plastid | 48.28 | 13.73 |
| HORVU6Hr1G037220.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| AGP50779 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU6Hr1G049380.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU0Hr1G036940.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU6Hr1G023010.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU0Hr1G026150.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU0Hr1G029900.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU0Hr1G037900.1 | Barley | cytosol, peroxisome, plastid | 32.18 | 12.96 |
| HORVU5Hr1G065060.1 | Barley | cytosol | 31.03 | 12.5 |
| HORVU7Hr1G065830.1 | Barley | cytosol | 31.03 | 12.5 |
| HORVU0Hr1G027550.1 | Barley | cytosol | 31.03 | 12.5 |
| HORVU2Hr1G090470.1 | Barley | plastid | 43.68 | 11.24 |
| HORVU4Hr1G038160.2 | Barley | plastid | 35.63 | 10.95 |
| HORVU3Hr1G038610.4 | Barley | plastid | 32.18 | 9.86 |
| HORVU6Hr1G059510.8 | Barley | cytosol, peroxisome | 42.53 | 8.55 |
| HORVU7Hr1G017670.1 | Barley | plastid | 31.03 | 8.39 |
| HORVU4Hr1G046480.1 | Barley | plastid | 32.18 | 7.53 |
| HORVU1Hr1G094480.1 | Barley | plastid | 25.29 | 5.19 |
Protein Annotations
| Gene3D:3.90.226.10 | MapMan:35.1 | UniProt:A0A287KX83 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf |
| InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:HORVU3Hr1G044510 | EnsemblPlants:HORVU3Hr1G044510.1 | PFAM:PF00574 |
| PRINTS:PR00127 | ScanProsite:PS00381 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF20 | SUPFAM:SSF52096 |
| TMHMM:TMhelix | UniParc:UPI000B461D2D | : | : | : | : |
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287KX83]
Coordinates
chrchr3H:+:286804255..286804951
Molecular Weight (calculated)
8989.3 Da
IEP (calculated)
9.559
GRAVY (calculated)
0.485
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: VSIERTLALA RGCLQGFVEV AITSCRGMGI YDAMKFCKAD ISTVCFGLAA SMGAFLLAAG TKGKRFCMPN ARIMIHQPSG GAGGKVG
001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
Arabidopsis Description
CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.