Factsheet for HORVU3Hr1G044750.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G094480.1
HORVU3Hr1G038610.4
HORVU3Hr1G044510.1
HORVU3Hr1G044530.1
HORVU4Hr1G053660.1
HORVU4Hr1G063150.3
HORVU7Hr1G017670.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATCG00670.1	HORVU4Hr1G053660.1	AT1G02560.1	14593120
ATCG00670.1	HORVU7Hr1G017670.1	AT1G12410.1	14593120
ATCG00670.1	HORVU1Hr1G094480.1	AT1G49970.1	14593120
ATCG00670.1	HORVU3Hr1G044510.1	AT1G66670.1	14593120
ATCG00670.1	HORVU3Hr1G044530.1	AT1G66670.1	14593120
ATCG00670.1	HORVU4Hr1G063150.3	AT4G12060.1	14593120
ATCG00670.1	HORVU3Hr1G038610.4	AT4G17040.1	14593120
ATCG00670.1	HORVU4Hr1G063150.3	AT4G25370.1	14593120

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G111400.1	Wheat	cytosol	72.46	87.72
PGSC0003DMT400055547	Potato	cytosol	28.99	57.97
AGP50779	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU5Hr1G065060.1	Barley	cytosol	88.41	56.48
HORVU6Hr1G023010.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU6Hr1G037220.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU6Hr1G049380.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU7Hr1G065830.1	Barley	cytosol	88.41	56.48
HORVU0Hr1G037900.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU0Hr1G036940.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU0Hr1G029900.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
HORVU0Hr1G027550.1	Barley	cytosol	88.41	56.48
HORVU0Hr1G026150.1	Barley	cytosol, peroxisome, plastid	88.41	56.48
PGSC0003DMT400013567	Potato	cytosol, endoplasmic reticulum, mitochondrion	42.75	56.19
TraesCS3B01G187300.1	Wheat	cytosol	87.68	56.02
GRMZM5G804708_P01	Maize	plastid	87.68	56.02
CAA33972	Rice	cytosol	85.51	54.63
TraesCSU01G266900.1	Wheat	cytosol	66.67	50.83
ATCG00670.1	Thale cress	cytosol	59.42	41.84
Solyc01g007490.2.1	Tomato	plastid	58.7	39.32
HORVU3Hr1G053800.1	Barley	endoplasmic reticulum	36.96	36.69
Solyc09g065790.1.1	Tomato	cytosol	44.2	34.66
HORVU3Hr1G044510.1	Barley	extracellular	17.39	27.59
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.77	24.68
HORVU7Hr1G017670.1	Barley	plastid	36.23	15.53
HORVU4Hr1G038160.2	Barley	plastid	30.43	14.84
HORVU3Hr1G044530.1	Barley	plastid	32.61	14.75
HORVU4Hr1G053660.1	Barley	plastid	29.71	13.4
HORVU3Hr1G038610.4	Barley	plastid	23.91	11.62
HORVU2Hr1G090470.1	Barley	plastid	27.54	11.24
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	28.99	9.24
HORVU4Hr1G046480.1	Barley	plastid	22.46	8.33
HORVU1Hr1G094480.1	Barley	plastid	25.36	8.25

Protein Annotations

EnsemblPlants:HORVU3Hr1G044750.2	EnsemblPlantsGene:HORVU3Hr1G044750	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	PANTHER:PTHR10381	PANTHER:PTHR10381:SF19	PFAM:PF00574	PRINTS:PR00127
SUPFAM:SSF52096	UniParc:UPI000B4768FB	UniProt:A0A287KXB6	MapMan:50.3.4	:	:

Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287KXB6]

Coordinates

chrchr3H:-:290173189..290173878

Molecular Weight (calculated)

15558.4 Da

IEP (calculated)

7.504

GRAVY (calculated)

0.362

Length

138 amino acids

Sequence
(BLAST)

001: MPIGVLKVPY RIPGDEEATW VDLYNVMYRE RTLFLGQQIR CEITNHITGL MVYLSREYGI GDIFLFITSP GGWLISGMAI FDTMQTVTPD IYTICLRIAT
101: SMASVILLGG EPTKRIAFPH ARIMLHEPAS KPLLLLKI

Best Arabidopsis Sequence Match ( ATCG00670.1 )
(BLAST)

001: MPIGVPKVPF RSPGEGDTSW VDIYNRLYRE RLFFLGQEVD TEISNQLISL MIYLSIEKDT KDLYLFINSP GGWVISGMAI YDTMQFVRPD VQTICMGLAA
101: SIASFILVGG AITKRIAFPH ARVMIHQPAS SFYEAQTGEF ILEAEELLKL RETITRVYVQ RTGKPIWVIS EDMERDVFMS ATEAQAHGIV DLVAVQ

Arabidopsis Description

CLPP1plastid-encoded CLP P [Source:TAIR;Acc:ATCG00670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.