CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24490	Soybean	plastid	96.7	96.7
VIT_03s0063g02300.t01	Wine grape	plastid	76.19	77.32
GSMUA_Achr8P05270_001	Banana	plastid	72.16	74.06
CDY31211	Canola	plastid	72.53	73.33
CDY21009	Canola	plastid	71.79	72.59
PGSC0003DMT400084282	Potato	plastid	72.89	72.36
Bra016816.1-P	Field mustard	plastid	71.43	72.22
CDY34832	Canola	plastid	72.16	72.16
Solyc10g051310.1.1	Tomato	plastid	72.16	71.64
Bra031777.1-P	Field mustard	plastid	71.06	71.06
AT1G11750.2	Thale cress	plastid	73.63	69.55
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.05	67.53
Os03t0411500-01	Rice	plastid	58.97	62.16
CDY34630	Canola	plastid	37.73	57.87
TraesCS4D01G157200.1	Wheat	plastid	56.04	57.52
TraesCS4B01G165100.1	Wheat	plastid	55.68	57.14
EES07709	Sorghum	plastid	56.04	55.43
TraesCS4A01G149900.1	Wheat	plastid	56.04	55.23
HORVU4Hr1G038160.2	Barley	plastid	54.95	53.0
KRH24178	Soybean	mitochondrion	28.21	32.63
KRH31786	Soybean	nucleus, plastid	35.9	32.34
KRH29139	Soybean	mitochondrion, nucleus	27.84	31.93
KRH69210	Soybean	nucleus, plastid	35.9	31.51
KRH70450	Soybean	plastid	32.6	27.9
KRH01676	Soybean	plastid	32.6	27.64
KRH39679	Soybean	nucleus, plastid	30.77	27.45
KRH76388	Soybean	nucleus, plastid	30.4	27.12
KRH68271	Soybean	plastid	29.3	26.58
KRH04225	Soybean	plastid	28.57	25.66
KRH57519	Soybean	plastid	28.21	25.33
KRH57313	Soybean	endoplasmic reticulum, extracellular	26.01	22.76
KRG96809	Soybean	plastid	26.37	22.02
KRH68514	Soybean	plastid	25.64	21.6
KRH04045	Soybean	mitochondrion	26.74	21.28
KRG91103	Soybean	plastid	22.71	16.67
KRH35674	Soybean	plastid	22.34	16.4

Protein Annotations

EntrezGene:100799710	MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EMBL:ACUP02006801	InterPro:ClpP	InterPro:ClpP/TepA
InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	EnsemblPlantsGene:GLYMA_11G119300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:I1LJF6
EnsemblPlants:KRH29491	ProteinID:KRH29491	ProteinID:KRH29491.1	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF8	MEROPS:S14.006	SUPFAM:SSF52096	UniParc:UPI000233CE30
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:9067166..9070714

Molecular Weight (calculated)

29382.3 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.057

Length

273 amino acids

Sequence
(BLAST)

001: MVPQALSVPA SASFTIASRT RSPSHLVFSH RNPCSIASSL PNPYGHSSGV GLSSKSRGFP LKLDEKNIHG ASTSYGAIEA KGNPPITPAV MTPGGPLDLS
101: SVLFRNRIIF IGQPVNSQVA QRVISQLVTL ATIDENADIL VYINCPGGST YSVLAIYDCM SWIKPKVGTV CFGVAASQGA LLLAGGEKGM RYAMPNARIM
201: IHQPQSGCGG HVEDVRRQVN EAVQSRHKID KMYSVFTGQP LEKVQQYTER DRFLSVSEAL EFGLIDGVLE TEY

Best Arabidopsis Sequence Match ( AT1G11750.2 )
(BLAST)

001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP SSLPLPILNI LKSSTVYFIF GVIEAKKGNP
101: PVMPSVMTPG GPLDLSSVLF RNRIIFIGQP INAQVAQRVI SQLVTLASID DKSDILMYLN CPGGSTYSVL AIYDCMSWIK PKVGTVAFGV AASQGALLLA
201: GGEKGMRYAM PNTRVMIHQP QTGCGGHVED VRRQVNEAIE ARQKIDRMYA AFTGQPLEKV QQYTERDRFL SASEALEFGL IDGLLETEY

Arabidopsis Description

CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.