Factsheet for Bra016816.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21009	Canola	plastid	98.52	98.52
Bra031777.1-P	Field mustard	plastid	94.81	93.77
AT1G11750.2	Thale cress	plastid	92.22	86.16
VIT_03s0063g02300.t01	Wine grape	plastid	71.48	71.75
KRH29491	Soybean	plastid	72.22	71.43
KRH24490	Soybean	plastid	71.48	70.7
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.0	70.13
GSMUA_Achr8P05270_001	Banana	plastid	67.78	68.8
PGSC0003DMT400084282	Potato	plastid	67.78	66.55
Solyc10g051310.1.1	Tomato	plastid	67.41	66.18
Os03t0411500-01	Rice	plastid	58.89	61.39
TraesCS4D01G157200.1	Wheat	plastid	55.19	56.02
EES07709	Sorghum	plastid	57.04	55.8
TraesCS4A01G149900.1	Wheat	plastid	57.04	55.6
TraesCS4B01G165100.1	Wheat	plastid	54.44	55.26
HORVU4Hr1G038160.2	Barley	plastid	55.56	53.0
Bra009331.1-P	Field mustard	mitochondrion	27.78	31.51
Bra013020.1-P	Field mustard	mitochondrion	27.04	31.06
Bra033332.1-P	Field mustard	plastid	32.96	30.27
Bra030504.1-P	Field mustard	plastid	31.85	28.76
Bra025079.1-P	Field mustard	plastid	28.15	26.39
Bra019764.1-P	Field mustard	plastid	27.04	26.16
Bra004177.1-P	Field mustard	plastid	29.26	25.24
Bra040108.1-P	Field mustard	plastid	25.19	22.3
Bra030756.1-P	Field mustard	plastid	26.3	21.98
Bra012683.1-P	Field mustard	plastid	24.81	21.82
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.93	17.9
Bra014229.1-P	Field mustard	plastid	22.59	15.72

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra016816	EnsemblPlants:Bra016816.1	EnsemblPlants:Bra016816.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
UniProt:M4DJY8	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00382	PANTHER:PTHR10381
PANTHER:PTHR10381:SF8	SUPFAM:SSF52096	UniParc:UPI00025463F6	SEG:seg	:	:

Description

AT1G11750 (E=7e-129) CLPP6, NCLPP1, NCLPP6 | CLPP6; serine-type endopeptidase

Coordinates

chrA08:-:20095989..20097746

Molecular Weight (calculated)

29146.2 Da

IEP (calculated)

9.688

GRAVY (calculated)

-0.120

Length

270 amino acids

Sequence
(BLAST)

001: MAGLAISPPL SLTFSSRTRN AKPTSYLSHN QRNLTRRIVS ALPSPYGDSL KAGLSSNVSG NKDPRNIAPR SGVIGAKKGT PPVMPSVMTP GGPLDLSSVL
101: FRNRIIFIGQ PINAQVAQRV ISQLVTLASI DDKSDILIYL NCPGGSTYSV LAIYDCMSWI KPKVGTVAFG VAASQGALLL AGGEKGMRYA MPNTRVMIHQ
201: PQTGCGGHVE DVRRQVNEAI EARQKIDRMY AAFTGQTLET VQQYTERDRF LSASEALEFG LIDGLLETEY

Best Arabidopsis Sequence Match ( AT1G11750.1 )
(BLAST)

001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP RFGVIEAKKG NPPVMPSVMT PGGPLDLSSV
101: LFRNRIIFIG QPINAQVAQR VISQLVTLAS IDDKSDILMY LNCPGGSTYS VLAIYDCMSW IKPKVGTVAF GVAASQGALL LAGGEKGMRY AMPNTRVMIH
201: QPQTGCGGHV EDVRRQVNEA IEARQKIDRM YAAFTGQPLE KVQQYTERDR FLSASEALEF GLIDGLLETE Y

Arabidopsis Description

CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.