Factsheet for Bra030756.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31112	Canola	plastid	100.0	100.0
CDY32150	Canola	plastid	99.07	98.46
CDY71339	Canola	endoplasmic reticulum	35.29	89.06
AT1G09130.3	Thale cress	plastid	92.26	80.54
VIT_14s0060g02160.t01	Wine grape	plastid	75.23	75.47
KRG96809	Soybean	plastid	74.3	73.39
KRH68514	Soybean	plastid	73.06	72.84
Solyc01g099690.2.1	Tomato	plastid	71.21	70.55
GSMUA_Achr3P08150_001	Banana	plastid	67.8	64.99
TraesCS4D01G167900.1	Wheat	golgi, plastid	61.61	59.05
Zm00001d029121_P005	Maize	plastid	61.92	59.0
OQU92609	Sorghum	plastid	61.92	59.0
TraesCS4B01G154900.3	Wheat	plastid	61.3	58.75
TraesCS4A01G139700.3	Wheat	plastid	61.3	58.75
Os03t0344900-00	Rice	plastid	61.92	58.65
HORVU4Hr1G046480.1	Barley	plastid	61.3	53.23
Bra012683.1-P	Field mustard	plastid	32.2	33.88
Bra040108.1-P	Field mustard	plastid	31.89	33.77
Bra013020.1-P	Field mustard	mitochondrion	22.6	31.06
Bra009331.1-P	Field mustard	mitochondrion	21.98	29.83
Bra014229.1-P	Field mustard	plastid	34.37	28.61
Bra033332.1-P	Field mustard	plastid	24.46	26.87
Bra025079.1-P	Field mustard	plastid	23.53	26.39
Bra031777.1-P	Field mustard	plastid	22.29	26.37
Bra016816.1-P	Field mustard	plastid	21.98	26.3
Bra030504.1-P	Field mustard	plastid	23.84	25.75
Bra019764.1-P	Field mustard	plastid	21.67	25.09
Bra004177.1-P	Field mustard	plastid	22.29	23.0
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.74	17.14

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra030756	EnsemblPlants:Bra030756.1	EnsemblPlants:Bra030756.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009532	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009941	GO:GO:0016787	GO:GO:0019538	UniProt:M4EPN6	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF6	SUPFAM:SSF52096	UniParc:UPI0001CA8F75	SEG:seg	:

Description

AT1G09130 (E=1e-155) | ATP-dependent Clp protease proteolytic subunit, putative

Coordinates

chrA08:+:20475102..20477099

Molecular Weight (calculated)

35408.1 Da

IEP (calculated)

8.748

GRAVY (calculated)

-0.124

Length

323 amino acids

Sequence
(BLAST)

001: MASCLQASMN SLLPRSSPPL SLNSSGRRNS KAFRVKAAAK IPMPPINPND PFLSKLASVA AQSPERLIAR PLNADTPPYL DIFDSPQLMS SPAQVERSVA
101: YNEHRPRTPP PDLPSMLLDG RIVYIGMPLV PAVTELIVAE LMYLQWLDPK EPIYIYINST GTTRDDGETV GMESEGFAIY DSLMQLKNEV HTVCVGAAIG
201: HACLLLSAGT KGKRFMMPHS KAMIQQPRVP SSGLMPASDV LIRAKEVITN RDILVGLLAK HTGNSVETVA NVMRRPYYMD ALKAKEFGVI DKVLWRGQEK
301: IIADVVPSDE FDKNAGIRSA ERV

Best Arabidopsis Sequence Match ( AT1G09130.3 )
(BLAST)

001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSAS WRRTNRLTKI TLAADCLVSN HLVNVNMRLG ESYLKDLEIL

Arabidopsis Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.