Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030756.1-P | Field mustard | plastid | 80.54 | 92.26 |
| CDY31112 | Canola | plastid | 80.54 | 92.26 |
| CDY32150 | Canola | plastid | 80.0 | 91.08 |
| CDX95009 | Canola | plastid | 73.78 | 88.93 |
| CDY71339 | Canola | endoplasmic reticulum | 30.0 | 86.72 |
| VIT_14s0060g02160.t01 | Wine grape | plastid | 67.03 | 77.02 |
| KRH68514 | Soybean | plastid | 65.95 | 75.31 |
| KRG96809 | Soybean | plastid | 66.49 | 75.23 |
| Solyc01g099690.2.1 | Tomato | plastid | 63.78 | 72.39 |
| GSMUA_Achr3P08150_001 | Banana | plastid | 60.27 | 66.17 |
| Os03t0344900-00 | Rice | plastid | 54.32 | 58.94 |
| OQU92609 | Sorghum | plastid | 53.78 | 58.7 |
| TraesCS4D01G167900.1 | Wheat | golgi, plastid | 53.24 | 58.46 |
| TraesCS4A01G139700.3 | Wheat | plastid | 52.97 | 58.16 |
| TraesCS4B01G154900.3 | Wheat | plastid | 52.7 | 57.86 |
| Zm00001d029121_P005 | Maize | plastid | 52.97 | 57.82 |
| HORVU4Hr1G046480.1 | Barley | plastid | 52.97 | 52.69 |
| AT4G17040.1 | Thale cress | plastid | 28.11 | 34.1 |
| AT5G23140.1 | Thale cress | mitochondrion, plastid | 20.27 | 31.12 |
| AT1G49970.1 | Thale cress | plastid | 30.54 | 29.2 |
| AT1G02560.1 | Thale cress | plastid | 21.08 | 26.17 |
| AT5G45390.1 | Thale cress | plastid | 20.0 | 25.34 |
| ATCG00670.1 | Thale cress | cytosol | 13.24 | 25.0 |
| AT1G12410.1 | Thale cress | plastid | 18.65 | 24.73 |
| AT1G11750.2 | Thale cress | plastid | 19.19 | 24.57 |
| AT1G66670.1 | Thale cress | plastid | 19.19 | 22.98 |
Protein Annotations
| MapMan:19.4.2.9.2 | Gene3D:3.90.226.10 | EntrezGene:837432 | ProteinID:AEE28399.1 | ArrayExpress:AT1G09130 | EnsemblPlantsGene:AT1G09130 |
| RefSeq:AT1G09130 | TAIR:AT1G09130 | RefSeq:AT1G09130-TAIR-G | EnsemblPlants:AT1G09130.3 | TAIR:AT1G09130.3 | Unigene:At.25478 |
| InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | UniProt:F4HZE0 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004252 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009507 | GO:GO:0009532 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0016787 | GO:GO:0019538 |
| RefSeq:NP_001184945.1 | PFAM:PF00574 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF6 | SUPFAM:SSF52096 | UniParc:UPI0001E92AE2 | SEG:seg |
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
Coordinates
chr1:-:2939577..2942288
Molecular Weight (calculated)
40921.8 Da
IEP (calculated)
9.033
GRAVY (calculated)
-0.158
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSAS WRRTNRLTKI TLAADCLVSN HLVNVNMRLG ESYLKDLEIL
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSAS WRRTNRLTKI TLAADCLVSN HLVNVNMRLG ESYLKDLEIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.