Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39425 | Canola | plastid | 96.23 | 97.57 |
| CDY38981 | Canola | plastid | 96.92 | 97.25 |
| Bra025079.1-P | Field mustard | plastid | 95.89 | 97.22 |
| GSMUA_Achr6P01290_001 | Banana | extracellular, peroxisome, plastid | 63.01 | 83.64 |
| VIT_12s0028g01250.t01 | Wine grape | plastid | 71.92 | 72.16 |
| KRH39679 | Soybean | nucleus, plastid | 72.95 | 69.61 |
| KRH76388 | Soybean | nucleus, plastid | 72.26 | 68.95 |
| PGSC0003DMT400079259 | Potato | plastid | 66.44 | 64.88 |
| EER94414 | Sorghum | plastid | 61.64 | 62.28 |
| Solyc08g075750.2.1 | Tomato | plastid | 64.04 | 61.92 |
| Os10t0580800-01 | Rice | plastid | 60.96 | 60.75 |
| TraesCS1B01G213300.1 | Wheat | plastid | 59.25 | 58.45 |
| TraesCS1D01G202100.1 | Wheat | plastid | 58.9 | 58.11 |
| TraesCS1A01G198400.1 | Wheat | plastid | 58.9 | 58.11 |
| Zm00001d030149_P001 | Maize | mitochondrion | 61.99 | 56.92 |
| ATCG00670.1 | Thale cress | cytosol | 23.29 | 34.69 |
| AT1G66670.1 | Thale cress | plastid | 36.3 | 34.3 |
| AT1G02560.1 | Thale cress | plastid | 33.9 | 33.22 |
| AT5G23140.1 | Thale cress | mitochondrion, plastid | 27.4 | 33.2 |
| AT1G11750.2 | Thale cress | plastid | 26.71 | 26.99 |
| AT1G12410.1 | Thale cress | plastid | 25.34 | 26.52 |
| AT4G17040.1 | Thale cress | plastid | 26.37 | 25.25 |
| AT1G09130.3 | Thale cress | plastid | 25.34 | 20.0 |
| AT1G49970.1 | Thale cress | plastid | 23.29 | 17.57 |
Protein Annotations
| MapMan:19.4.2.9.1 | PDB:1R91 | Gene3D:3.90.226.10 | EntrezGene:834575 | EMBL:AB022329 | ProteinID:AED95243.1 |
| EMBL:AJ000930 | ArrayExpress:AT5G45390 | EnsemblPlantsGene:AT5G45390 | RefSeq:AT5G45390 | TAIR:AT5G45390 | RefSeq:AT5G45390-TAIR-G |
| EnsemblPlants:AT5G45390.1 | TAIR:AT5G45390.1 | EMBL:AY042832 | EMBL:AY087717 | Unigene:At.387 | ProteinID:BAB09167.1 |
| EMBL:BT006321 | Symbol:CLPP4 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 |
| GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009658 | GO:GO:0009840 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0048510 | HAMAP:MF_00444 | RefSeq:NP_568644.1 | PFAM:PF00574 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00127 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF24 | UniProt:Q94B60 |
| MEROPS:S14.010 | SUPFAM:SSF52096 | UniParc:UPI000009FE46 | SEG:seg | : | : |
Description
CLPP4ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94B60]
Coordinates
chr5:+:18396254..18398138
Molecular Weight (calculated)
31500.0 Da
IEP (calculated)
5.181
GRAVY (calculated)
-0.043
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.