Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr6P01290_001 | Banana | extracellular, peroxisome, plastid | 62.54 | 82.73 |
CDY39425 | Canola | plastid | 71.48 | 72.22 |
CDY38981 | Canola | plastid | 72.16 | 72.16 |
AT5G45390.1 | Thale cress | plastid | 72.16 | 71.92 |
Bra025079.1-P | Field mustard | plastid | 71.13 | 71.88 |
KRH39679 | Soybean | nucleus, plastid | 74.91 | 71.24 |
KRH76388 | Soybean | nucleus, plastid | 74.23 | 70.59 |
PGSC0003DMT400079259 | Potato | plastid | 69.42 | 67.56 |
Solyc08g075750.2.1 | Tomato | plastid | 68.73 | 66.23 |
EER94414 | Sorghum | plastid | 61.51 | 61.94 |
Os10t0580800-01 | Rice | plastid | 61.51 | 61.09 |
TraesCS1B01G213300.1 | Wheat | plastid | 59.11 | 58.11 |
TraesCS1A01G198400.1 | Wheat | plastid | 58.76 | 57.77 |
TraesCS1D01G202100.1 | Wheat | plastid | 58.76 | 57.77 |
Zm00001d030149_P001 | Maize | mitochondrion | 61.17 | 55.97 |
VIT_14s0006g01880.t01 | Wine grape | plastid | 40.21 | 36.56 |
VIT_01s0011g02100.t01 | Wine grape | mitochondrion | 30.24 | 36.51 |
VIT_07s0005g01530.t01 | Wine grape | plastid | 33.33 | 33.56 |
VIT_00s0309g00040.t01 | Wine grape | endoplasmic reticulum | 16.49 | 30.19 |
VIT_00s0309g00080.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 16.84 | 28.99 |
VIT_03s0063g02300.t01 | Wine grape | plastid | 26.46 | 28.62 |
VIT_00s0204g00220.t01 | Wine grape | plastid | 26.12 | 26.03 |
VIT_02s0025g05140.t01 | Wine grape | plastid | 24.4 | 24.4 |
VIT_14s0060g02160.t01 | Wine grape | plastid | 26.12 | 23.6 |
VIT_03s0091g00700.t01 | Wine grape | plastid | 22.68 | 17.01 |
Protein Annotations
EntrezGene:100254000 | wikigene:100254000 | MapMan:19.4.2.9.1 | Gene3D:3.90.226.10 | ProteinID:CCB47429 | ProteinID:CCB47429.1 |
InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS | UniProt:F6H561 | EMBL:FN595235 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0016787 | GO:GO:0019538 | EntrezGene:LOC100254000 | wikigene:LOC100254000 | HAMAP:MF_00444 | PFAM:PF00574 |
PRINTS:PR00127 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF24 | MEROPS:S14.010 | SUPFAM:SSF52096 |
TIGR:TC67440 | UniParc:UPI00015C9C6A | ArrayExpress:VIT_12s0028g01250 | EnsemblPlantsGene:VIT_12s0028g01250 | EnsemblPlants:VIT_12s0028g01250.t01 | RefSeq:XP_002282652 |
RefSeq:XP_002282652.1 | RefSeq:XP_010657084.1 | SEG:seg | : | : | : |
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6H561]
Coordinates
chr12:-:1886665..1894952
Molecular Weight (calculated)
31204.7 Da
IEP (calculated)
5.150
GRAVY (calculated)
0.049
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSVSSPL PSLGFPNLRT TSFPKPSSFS LRPLISASLS SSPSLKALNT KTLDSVLALP LAHGSQTPGM GARGAEADAM GLLLKERIVF LGNNVDDFVA
101: DAIISQLLLL DAQDPTKDIR LFINSPGGSL SATMAIYDIV QLVRADVSTV ALGISASTAS IILGGGTKGK RFAMPNTRIM IHQPLGGASG QAIDVEIQAQ
201: EIMHNKSNVT KIIAGFSGRS FEQVEKDIDR DRYMSPIEAV EYGIIDAVID RDSIIPLVPV PEKVKSRLNY EEISKDPRKF LTPDIPDDEI Y
101: DAIISQLLLL DAQDPTKDIR LFINSPGGSL SATMAIYDIV QLVRADVSTV ALGISASTAS IILGGGTKGK RFAMPNTRIM IHQPLGGASG QAIDVEIQAQ
201: EIMHNKSNVT KIIAGFSGRS FEQVEKDIDR DRYMSPIEAV EYGIIDAVID RDSIIPLVPV PEKVKSRLNY EEISKDPRKF LTPDIPDDEI Y
001: MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY
Arabidopsis Description
CLPP4ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94B60]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.