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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P01290_001 Banana extracellular, peroxisome, plastid 62.54 82.73
CDY39425 Canola plastid 71.48 72.22
CDY38981 Canola plastid 72.16 72.16
AT5G45390.1 Thale cress plastid 72.16 71.92
Bra025079.1-P Field mustard plastid 71.13 71.88
KRH39679 Soybean nucleus, plastid 74.91 71.24
KRH76388 Soybean nucleus, plastid 74.23 70.59
PGSC0003DMT400079259 Potato plastid 69.42 67.56
Solyc08g075750.2.1 Tomato plastid 68.73 66.23
EER94414 Sorghum plastid 61.51 61.94
Os10t0580800-01 Rice plastid 61.51 61.09
TraesCS1B01G213300.1 Wheat plastid 59.11 58.11
TraesCS1A01G198400.1 Wheat plastid 58.76 57.77
TraesCS1D01G202100.1 Wheat plastid 58.76 57.77
Zm00001d030149_P001 Maize mitochondrion 61.17 55.97
VIT_14s0006g01880.t01 Wine grape plastid 40.21 36.56
VIT_01s0011g02100.t01 Wine grape mitochondrion 30.24 36.51
VIT_07s0005g01530.t01 Wine grape plastid 33.33 33.56
VIT_00s0309g00040.t01 Wine grape endoplasmic reticulum 16.49 30.19
VIT_00s0309g00080.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 16.84 28.99
VIT_03s0063g02300.t01 Wine grape plastid 26.46 28.62
VIT_00s0204g00220.t01 Wine grape plastid 26.12 26.03
VIT_02s0025g05140.t01 Wine grape plastid 24.4 24.4
VIT_14s0060g02160.t01 Wine grape plastid 26.12 23.6
VIT_03s0091g00700.t01 Wine grape plastid 22.68 17.01
Protein Annotations
EntrezGene:100254000wikigene:100254000MapMan:19.4.2.9.1Gene3D:3.90.226.10ProteinID:CCB47429ProteinID:CCB47429.1
InterPro:ClpPInterPro:ClpP/TepAInterPro:ClpP/crotonase-like_dom_sfInterPro:ClpP_His_ASUniProt:F6H561EMBL:FN595235
GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0016787GO:GO:0019538EntrezGene:LOC100254000wikigene:LOC100254000HAMAP:MF_00444PFAM:PF00574
PRINTS:PR00127ScanProsite:PS00382PANTHER:PTHR10381PANTHER:PTHR10381:SF24MEROPS:S14.010SUPFAM:SSF52096
TIGR:TC67440UniParc:UPI00015C9C6AArrayExpress:VIT_12s0028g01250EnsemblPlantsGene:VIT_12s0028g01250EnsemblPlants:VIT_12s0028g01250.t01RefSeq:XP_002282652
RefSeq:XP_002282652.1RefSeq:XP_010657084.1SEG:seg:::
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6H561]
Coordinates
chr12:-:1886665..1894952
Molecular Weight (calculated)
31204.7 Da
IEP (calculated)
5.150
GRAVY (calculated)
0.049
Length
291 amino acids
Sequence
(BLAST)
001: MGLLSVSSPL PSLGFPNLRT TSFPKPSSFS LRPLISASLS SSPSLKALNT KTLDSVLALP LAHGSQTPGM GARGAEADAM GLLLKERIVF LGNNVDDFVA
101: DAIISQLLLL DAQDPTKDIR LFINSPGGSL SATMAIYDIV QLVRADVSTV ALGISASTAS IILGGGTKGK RFAMPNTRIM IHQPLGGASG QAIDVEIQAQ
201: EIMHNKSNVT KIIAGFSGRS FEQVEKDIDR DRYMSPIEAV EYGIIDAVID RDSIIPLVPV PEKVKSRLNY EEISKDPRKF LTPDIPDDEI Y
Best Arabidopsis Sequence Match ( AT5G45390.1 )
(BLAST)
001: MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY
Arabidopsis Description
CLPP4ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94B60]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.