Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014229.1-P | Field mustard | plastid | 94.83 | 94.59 |
| CDY59367 | Canola | plastid | 94.83 | 94.59 |
| CDY03582 | Canola | plastid | 94.83 | 94.34 |
| CDY46278 | Canola | cytosol | 48.84 | 83.63 |
| KRH35674 | Soybean | plastid | 70.03 | 72.85 |
| KRG91103 | Soybean | plastid | 69.77 | 72.58 |
| VIT_03s0091g00700.t01 | Wine grape | plastid | 70.03 | 69.85 |
| PGSC0003DMT400065220 | Potato | plastid | 66.67 | 65.65 |
| GSMUA_Achr2P08390_001 | Banana | plastid | 67.44 | 65.58 |
| Solyc10g049710.1.1 | Tomato | plastid | 64.86 | 65.36 |
| EES20050 | Sorghum | plastid | 54.26 | 54.12 |
| Os05t0592100-01 | Rice | plastid | 53.23 | 53.37 |
| Zm00001d039167_P001 | Maize | plastid | 52.97 | 52.84 |
| TraesCS1A01G437500.2 | Wheat | plastid | 52.45 | 52.45 |
| TraesCS1B01G472100.1 | Wheat | plastid | 51.94 | 52.21 |
| TraesCS1D01G445300.1 | Wheat | plastid | 51.68 | 51.41 |
| HORVU1Hr1G094480.1 | Barley | plastid | 52.45 | 47.88 |
| AT4G17040.1 | Thale cress | plastid | 25.58 | 32.46 |
| AT1G09130.3 | Thale cress | plastid | 29.2 | 30.54 |
| AT5G23140.1 | Thale cress | mitochondrion, plastid | 17.83 | 28.63 |
| AT1G12410.1 | Thale cress | plastid | 19.64 | 27.24 |
| ATCG00670.1 | Thale cress | cytosol | 13.44 | 26.53 |
| AT1G02560.1 | Thale cress | plastid | 19.38 | 25.17 |
| AT5G45390.1 | Thale cress | plastid | 17.57 | 23.29 |
| AT1G66670.1 | Thale cress | plastid | 17.57 | 22.01 |
| AT1G11750.2 | Thale cress | plastid | 15.76 | 21.11 |
Protein Annotations
| MapMan:19.4.2.9.2 | PDB:1R96 | Gene3D:3.90.226.10 | EntrezGene:841420 | ProteinID:AAF76446.1 | EMBL:AB022330 |
| ProteinID:AEE32501.1 | ArrayExpress:AT1G49970 | EnsemblPlantsGene:AT1G49970 | RefSeq:AT1G49970 | TAIR:AT1G49970 | RefSeq:AT1G49970-TAIR-G |
| EnsemblPlants:AT1G49970.1 | TAIR:AT1G49970.1 | EMBL:AY045677 | Unigene:At.23793 | EMBL:BT000572 | Symbol:CLPR1 |
| InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0006396 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009579 | GO:GO:0009658 | GO:GO:0009840 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0019538 | RefSeq:NP_564560.1 | PFAM:PF00574 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00127 | PANTHER:PTHR10381 |
| PANTHER:PTHR10381:SF18 | UniProt:Q9XJ35 | SUPFAM:SSF52096 | UniParc:UPI00000AC3A9 | SEG:seg | : |
Description
CLPR1ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ35]
Coordinates
chr1:-:18501570..18504654
Molecular Weight (calculated)
42629.9 Da
IEP (calculated)
8.842
GRAVY (calculated)
-0.441
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALVSPLT SQLNHEAVCS KFVLPKSPFM SGSKLFSSNM PCSTVPRRTR RSHCFASAKD MSFDHIPKQF RGDNLKDGVM QNFKNVPQYF YGLNSAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.