CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35674	Soybean	plastid	98.39	98.39
VIT_03s0091g00700.t01	Wine grape	plastid	78.23	75.0
GSMUA_Achr2P08390_001	Banana	plastid	75.27	70.35
AT1G49970.1	Thale cress	plastid	72.58	69.77
CDY46278	Canola	cytosol	42.2	69.47
CDY03582	Canola	plastid	71.51	68.38
Bra014229.1-P	Field mustard	plastid	71.24	68.3
CDY59367	Canola	plastid	71.24	68.3
PGSC0003DMT400065220	Potato	plastid	70.97	67.18
Solyc10g049710.1.1	Tomato	plastid	68.82	66.67
Os05t0592100-01	Rice	plastid	55.38	53.37
EES20050	Sorghum	plastid	55.38	53.09
TraesCS1A01G437500.2	Wheat	plastid	55.11	52.97
TraesCS1B01G472100.1	Wheat	plastid	54.57	52.73
Zm00001d039167_P001	Maize	plastid	54.84	52.58
TraesCS1D01G445300.1	Wheat	plastid	54.3	51.93
HORVU1Hr1G094480.1	Barley	plastid	54.57	47.88
KRH04225	Soybean	plastid	27.96	34.21
KRH57519	Soybean	plastid	27.15	33.22
KRH68514	Soybean	plastid	28.76	33.02
KRG96809	Soybean	plastid	28.49	32.42
KRH29139	Soybean	mitochondrion, nucleus	16.94	26.47
KRH24178	Soybean	mitochondrion	16.67	26.27
KRH31786	Soybean	nucleus, plastid	19.35	23.76
KRH39679	Soybean	nucleus, plastid	19.35	23.53
KRH76388	Soybean	nucleus, plastid	19.35	23.53
KRH69210	Soybean	nucleus, plastid	19.35	23.15
KRH57313	Soybean	endoplasmic reticulum, extracellular	19.35	23.08
KRH24490	Soybean	plastid	16.94	23.08
KRH29491	Soybean	plastid	16.67	22.71
KRH01676	Soybean	plastid	19.09	22.05
KRH70450	Soybean	plastid	18.82	21.94
KRH04045	Soybean	mitochondrion	19.35	20.99
KRH68271	Soybean	plastid	16.13	19.93

Protein Annotations

EntrezGene:100820008	MapMan:19.4.2.9.2	Gene3D:3.90.226.10	UniProt:A0A0R0EAT4	EMBL:ACUP02012661	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlantsGene:GLYMA_20G133300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlants:KRG91103
ProteinID:KRG91103	ProteinID:KRG91103.1	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF18
SUPFAM:SSF52096	UniParc:UPI000233DCF1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:37342277..37346498

Molecular Weight (calculated)

41292.2 Da

IEP (calculated)

9.191

GRAVY (calculated)

-0.492

Length

372 amino acids

Sequence
(BLAST)

001: MSSSLSLSLS APSIHDSSFL HGTKLFPFSR RVAPRRFNSF SAKCSLDHIP KQFRKENLKD GLMENYKNAP QSLYGLSPSQ MDMFMTEDNP IRQQSERVTE
101: ESISSAKNYM DNGGMWSLSG MGKNDASKYS MSVSMYRGGR GTGRPKTAPP DLPSLLLDAR ICYLGMPIVP AVTELIVAQF MWLDYDNPTK PIYLYINSSG
201: TLNEKNETVG SETEAYSIAD MMSYVKADVY TVNCGMAFGQ AAMLLSLGTK GYRAVQPNSS TKLYLPKVNR SSGAVIDMWI KAKELEANTE YYIELLAKGT
301: GKSKEEIAKD VQRPKYLQAQ DAIDYGIADK IIDSSSRDVA FEKRNYDEML AQSRAKRRQG GGNPQAAPSG FR

Best Arabidopsis Sequence Match ( AT1G49970.1 )
(BLAST)

001: MATALVSPLT SQLNHEAVCS KFVLPKSPFM SGSKLFSSNM PCSTVPRRTR RSHCFASAKD MSFDHIPKQF RGDNLKDGVM QNFKNVPQYF YGLNSAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR

Arabidopsis Description

CLPR1ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.