CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57519	Soybean	plastid	94.41	94.41
CDY71709	Canola	endoplasmic reticulum, extracellular	54.61	86.91
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	33.55	78.46
VIT_00s0204g00220.t01	Wine grape	plastid	74.01	77.05
CDY35605	Canola	plastid	73.36	73.6
CDY42955	Canola	plastid	73.03	72.79
CDY09652	Canola	plastid	72.7	72.7
PGSC0003DMT400067452	Potato	plastid	72.04	72.52
Bra040108.1-P	Field mustard	plastid	72.7	72.46
AT4G17040.1	Thale cress	plastid	72.7	72.46
CDX90492	Canola	plastid	73.03	72.31
CDY09656	Canola	plastid	72.7	72.22
Bra012683.1-P	Field mustard	plastid	72.7	71.99
Solyc08g077890.2.1	Tomato	plastid	70.07	70.53
Zm00001d040322_P002	Maize	plastid	63.16	66.44
EES00561	Sorghum	plastid	63.16	65.98
GSMUA_Achr9P24480_001	Banana	plastid	72.04	65.77
VIT_00s0309g00080.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	36.51	65.68
TraesCS3B01G216800.1	Wheat	plastid	60.86	64.91
TraesCS3A01G187300.1	Wheat	plastid	60.53	64.56
VIT_00s0309g00040.t01	Wine grape	endoplasmic reticulum	33.55	64.15
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	61.84	63.09
HORVU3Hr1G038610.4	Barley	plastid	58.88	63.03
TraesCS3D01G191100.2	Wheat	plastid	60.86	59.11
CDY43468	Canola	plastid	28.62	49.43
KRH29139	Soybean	mitochondrion, nucleus	26.32	33.61
KRH24178	Soybean	mitochondrion	25.66	33.05
KRG96809	Soybean	plastid	35.2	32.72
KRH68514	Soybean	plastid	34.54	32.41
KRH29491	Soybean	plastid	25.66	28.57
KRG91103	Soybean	plastid	34.21	27.96
KRH24490	Soybean	plastid	25.0	27.84
KRH35674	Soybean	plastid	33.88	27.69
KRH31786	Soybean	nucleus, plastid	27.3	27.39
KRH69210	Soybean	nucleus, plastid	27.3	26.69
KRH76388	Soybean	nucleus, plastid	25.99	25.82
KRH39679	Soybean	nucleus, plastid	25.99	25.82
KRH70450	Soybean	plastid	25.66	24.45
KRH01676	Soybean	plastid	25.66	24.22
KRH57313	Soybean	endoplasmic reticulum, extracellular	24.01	23.4
KRH68271	Soybean	plastid	22.7	22.92
KRH04045	Soybean	mitochondrion	23.68	20.99

Protein Annotations

EntrezGene:100780029	MapMan:19.4.2.9.2	Gene3D:3.90.226.10	EMBL:ACUP02010392	InterPro:ClpP	InterPro:ClpP/TepA
InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G147700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:I1MV74
EnsemblPlants:KRH04225	ProteinID:KRH04225	ProteinID:KRH04225.1	ProteinID:KRH04226.1	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF25	MEROPS:S14.001	SUPFAM:SSF52096	UniParc:UPI000233EABC	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:12177671..12188732

Molecular Weight (calculated)

33382.2 Da

IEP (calculated)

9.299

GRAVY (calculated)

-0.135

Length

304 amino acids

Sequence
(BLAST)

001: MEVATAASSF ALNKPMLALP SSSRTVTPIR CMNTSTSPVR TSLSTSFVAP YAGICSASSP FSGHKLRPSS LNPASFLGSN AKRGVVTMVI PFQRGSAWEQ
101: PPPDLASYLY KNRIVYLGMS LVPSVTELIL AEFLYLQYED DDKPIYLYIN STGTTKGGEK LGYETEAFAI YDVMRYVKPP IFTLCVGNAW GEAALLLAAG
201: AKGNRSALPS STIMIRQPIA RFQGQATDVN LARREVNNVK TELVKLYAKH MEKTPEQIEA DIQRPKYFSP SEAVEYGIID KVIYNDRGTE DRGVVSDLKK
301: ARLI

Best Arabidopsis Sequence Match ( AT1G09130.1 )
(BLAST)

001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV

Arabidopsis Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.