Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 36.36 | 49.23 |
| CDY71709 | Canola | endoplasmic reticulum, extracellular | 45.45 | 41.88 |
| AT4G17040.1 | Thale cress | plastid | 51.7 | 29.84 |
| CDY35605 | Canola | plastid | 51.14 | 29.7 |
| CDY09652 | Canola | plastid | 51.14 | 29.61 |
| CDY42955 | Canola | plastid | 51.14 | 29.51 |
| CDY09656 | Canola | plastid | 51.14 | 29.41 |
| CDX90492 | Canola | plastid | 51.14 | 29.32 |
| Bra012683.1-P | Field mustard | plastid | 51.14 | 29.32 |
| VIT_00s0204g00220.t01 | Wine grape | plastid | 47.73 | 28.77 |
| KRH04225 | Soybean | plastid | 49.43 | 28.62 |
| KRH57519 | Soybean | plastid | 48.86 | 28.29 |
| PGSC0003DMT400067452 | Potato | plastid | 47.16 | 27.48 |
| HORVU3Hr1G038610.4 | Barley | plastid | 44.32 | 27.46 |
| TraesCS3B01G216800.1 | Wheat | plastid | 43.75 | 27.02 |
| TraesCS3A01G187300.1 | Wheat | plastid | 43.75 | 27.02 |
| Solyc08g077890.2.1 | Tomato | plastid | 46.02 | 26.82 |
| EES00561 | Sorghum | plastid | 44.32 | 26.8 |
| Os01t0271400-00 | Rice | nucleus, plasma membrane, plastid | 44.89 | 26.51 |
| Zm00001d040322_P002 | Maize | plastid | 42.61 | 25.95 |
| TraesCS3D01G191100.2 | Wheat | plastid | 43.75 | 24.6 |
| GSMUA_Achr9P24480_001 | Banana | plastid | 46.02 | 24.32 |
| CDY71339 | Canola | endoplasmic reticulum | 17.61 | 24.22 |
| VIT_00s0309g00040.t01 | Wine grape | endoplasmic reticulum | 19.89 | 22.01 |
| CDY68541 | Canola | cytosol | 15.34 | 21.6 |
| VIT_00s0309g00080.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 19.32 | 20.12 |
| CDX69964 | Canola | plastid | 15.91 | 18.67 |
| CDY46278 | Canola | cytosol | 23.86 | 18.58 |
| CDY31112 | Canola | plastid | 32.39 | 17.65 |
| CDY32150 | Canola | plastid | 32.39 | 17.54 |
| CDX95009 | Canola | plastid | 28.98 | 16.61 |
| CDY21523 | Canola | mitochondrion | 21.59 | 15.97 |
| CDY61915 | Canola | mitochondrion | 20.45 | 15.25 |
| CDY02210 | Canola | mitochondrion | 19.89 | 14.89 |
| CDY69283 | Canola | plastid | 17.05 | 14.29 |
| CDX98066 | Canola | plastid | 21.59 | 13.62 |
| CDY26563 | Canola | plastid | 21.02 | 13.31 |
| CDY30078 | Canola | plastid | 21.02 | 13.26 |
| CDY51306 | Canola | plastid | 20.45 | 13.0 |
| CDX89962 | Canola | plastid | 21.59 | 12.93 |
| CDY59367 | Canola | plastid | 27.84 | 12.63 |
| CDY03582 | Canola | plastid | 27.84 | 12.6 |
| CDY15250 | Canola | plastid | 21.59 | 12.42 |
| CDY15433 | Canola | plastid | 19.89 | 11.51 |
| CDY21009 | Canola | plastid | 17.05 | 11.11 |
| CDY31211 | Canola | plastid | 17.05 | 11.11 |
| CDY38981 | Canola | plastid | 18.18 | 11.0 |
| CDY34832 | Canola | plastid | 17.05 | 10.99 |
| CDY39425 | Canola | plastid | 17.61 | 10.76 |
| CDX96137 | Canola | plastid | 18.75 | 10.54 |
| CDY36212 | Canola | plastid | 18.18 | 10.22 |
| CDY34630 | Canola | plastid | 10.23 | 10.11 |
| CDY15997 | Canola | plastid | 21.02 | 7.58 |
Protein Annotations
| EnsemblPlants:CDY43468 | EnsemblPlantsGene:GSBRNA2T00076704001 | Gene3D:3.90.226.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:ClpP |
| InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF25 | PFAM:PF00574 | ProteinID:CDY43468 |
| ProteinID:CDY43468.1 | SUPFAM:SSF52096 | UniParc:UPI0004EE39F4 | UniProt:A0A078I2Y3 | MapMan:35.1 | : |
Description
BnaC08g10850DBnaC08g10850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2Y3]
Coordinates
chrLK032558:+:52613..54070
Molecular Weight (calculated)
19673.7 Da
IEP (calculated)
4.697
GRAVY (calculated)
0.080
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAAATATS FTTLRARTSA IIPSPYKVYT VRIFEFEVFV AVADLLCCRG SDGSCNRADR LERLDICNGK NKLCDMRLPS EKEVQYLVEV SLTFTELILA
101: EFLYLQYEDE EKPIYLYINS TGTTNKLGYD TEAFAIYDVM GYVKPPIFTL CVRNAWREAA LLLTAGAKGN CSALPS
101: EFLYLQYEDE EKPIYLYINS TGTTNKLGYD TEAFAIYDVM GYVKPPIFTL CVRNAWREAA LLLTAGAKGN CSALPS
001: MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI
Arabidopsis Description
CLPR4ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V785]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.