CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013020.1-P	Field mustard	mitochondrion	99.57	99.57
CDY61915	Canola	mitochondrion	93.62	93.22
CDX69964	Canola	plastid	57.45	90.0
AT5G23140.1	Thale cress	mitochondrion, plastid	91.06	88.8
CDY21523	Canola	mitochondrion	87.66	86.55
PGSC0003DMT400027435	Potato	mitochondrion	80.0	78.99
PGSC0003DMT400082481	Potato	mitochondrion	79.15	78.81
KRH24178	Soybean	mitochondrion	78.3	77.97
Solyc04g009310.2.1	Tomato	plastid	77.87	77.54
KRH29139	Soybean	mitochondrion, nucleus	78.3	77.31
VIT_01s0011g02100.t01	Wine grape	mitochondrion	77.87	75.93
GSMUA_AchrUn_...	Banana	cytosol	54.89	63.55
Zm00001d002969_P001	Maize	mitochondrion	65.96	59.85
Zm00001d025891_P001	Maize	mitochondrion	65.53	59.23
TraesCS2B01G393400.1	Wheat	plastid	65.96	52.36
TraesCS2D01G372600.1	Wheat	plastid	66.38	52.0
KXG26753	Sorghum	plastid	65.96	51.67
GSMUA_Achr5P10890_001	Banana	plastid	57.45	50.56
Zm00001d017330_P001	Maize	plastid	60.0	50.0
Os04t0525600-01	Rice	mitochondrion	65.11	49.51
Zm00001d051203_P001	Maize	plastid	61.28	47.37
TraesCS6A01G220500.1	Wheat	plastid	60.0	47.0
TraesCS6B01G262000.1	Wheat	plastid	59.57	46.67
Os02t0634500-01	Rice	plastid	58.72	46.31
OQU85365	Sorghum	plastid	60.85	46.28
TraesCS6D01G214700.1	Wheat	plastid	57.87	45.95
HORVU2Hr1G090470.1	Barley	plastid	65.53	45.56
CDY71709	Canola	endoplasmic reticulum, extracellular	28.09	34.55
CDY51306	Canola	plastid	38.3	32.49
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	59.57	32.33
CDY68541	Canola	cytosol	17.02	32.0
CDX89962	Canola	plastid	39.15	31.29
CDY71339	Canola	endoplasmic reticulum	17.02	31.25
CDY15433	Canola	plastid	39.57	30.59
CDY15250	Canola	plastid	39.57	30.39
CDY39425	Canola	plastid	33.62	27.43
CDY38981	Canola	plastid	33.62	27.15
CDY09652	Canola	plastid	34.89	26.97
CDY09656	Canola	plastid	34.89	26.8
CDY34832	Canola	plastid	31.06	26.74
CDX90492	Canola	plastid	34.89	26.71
CDY31211	Canola	plastid	30.64	26.67
CDY21009	Canola	plastid	30.64	26.67
CDY42955	Canola	plastid	34.47	26.56
CDY35605	Canola	plastid	34.04	26.4
CDX96137	Canola	plastid	34.47	25.88
CDY36212	Canola	plastid	34.47	25.88
CDY30078	Canola	plastid	30.64	25.81
CDX98066	Canola	plastid	30.64	25.81
CDY26563	Canola	plastid	29.79	25.18
CDY31112	Canola	plastid	31.49	22.91
CDY32150	Canola	plastid	31.06	22.46
CDY69283	Canola	plastid	20.0	22.38
CDX95009	Canola	plastid	27.66	21.17
CDY46278	Canola	cytosol	19.57	20.35
CDY34630	Canola	plastid	15.32	20.22
CDY43468	Canola	plastid	14.89	19.89
CDY59367	Canola	plastid	28.94	17.53
CDY03582	Canola	plastid	28.94	17.48
CDY15997	Canola	plastid	30.21	14.55

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	GO:A0A078EJG7	EnsemblPlants:CDY02210	ProteinID:CDY02210	ProteinID:CDY02210.1
InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00113625001	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381
ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	SUPFAM:SSF52096	UniParc:UPI0004EDB2DE	SEG:seg

Description

BnaA03g39570D

Coordinates

chrLK031932:+:730857..731911

Molecular Weight (calculated)

25546.9 Da

IEP (calculated)

7.213

GRAVY (calculated)

-0.120

Length

235 amino acids

Sequence
(BLAST)

001: MMMMMRGLLS TATSSAGGGR RSYSLIPMVI EHSSRGERAY DIFSRLLKER IICINGPIND DTSHVVVAQL LFLESENPSK PIHMYLNSPG GHVTAGLAIY
101: DTMQYIRSPI STICLGQAAS MASLLLAAGA KGQRRSLPNA TVMIHQPSGG YSGQAKDLTI HTKQIVRVWD ALNGLYSKHT GQPVDVVAEN MDRDNFMTPQ
201: EAKAFGIIDE VIDERPLELV KDAVVGGESK DKSLS

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.