Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002969_P001 | Maize | mitochondrion | 94.23 | 94.59 |
| KXG26753 | Sorghum | plastid | 94.62 | 82.0 |
| Os04t0525600-01 | Rice | mitochondrion | 93.46 | 78.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.62 | 76.35 |
| TraesCS2B01G393400.1 | Wheat | plastid | 86.92 | 76.35 |
| TraesCS2D01G372600.1 | Wheat | plastid | 86.54 | 75.0 |
| CDX69964 | Canola | plastid | 40.38 | 70.0 |
| Zm00001d017330_P001 | Maize | plastid | 73.85 | 68.09 |
| HORVU2Hr1G090470.1 | Barley | plastid | 88.08 | 67.75 |
| KRH29139 | Soybean | mitochondrion, nucleus | 61.92 | 67.65 |
| CDY61915 | Canola | mitochondrion | 61.15 | 67.37 |
| Zm00001d051203_P001 | Maize | plastid | 78.46 | 67.11 |
| KRH24178 | Soybean | mitochondrion | 60.77 | 66.95 |
| VIT_01s0011g02100.t01 | Wine grape | mitochondrion | 61.54 | 66.39 |
| Bra009331.1-P | Field mustard | mitochondrion | 60.38 | 65.97 |
| Bra013020.1-P | Field mustard | mitochondrion | 59.62 | 65.96 |
| AT5G23140.1 | Thale cress | mitochondrion, plastid | 60.77 | 65.56 |
| CDY02210 | Canola | mitochondrion | 59.23 | 65.53 |
| Solyc04g009310.2.1 | Tomato | plastid | 59.23 | 65.25 |
| PGSC0003DMT400082481 | Potato | mitochondrion | 59.23 | 65.25 |
| CDY21523 | Canola | mitochondrion | 59.62 | 65.13 |
| PGSC0003DMT400027435 | Potato | mitochondrion | 58.08 | 63.45 |
| GSMUA_Achr5P10890_001 | Banana | plastid | 62.31 | 60.67 |
| Zm00001d047634_P002 | Maize | cytosol | 40.0 | 44.07 |
| Zm00001d028895_P001 | Maize | plastid | 40.77 | 33.87 |
| GRMZM5G804708_P01 | Maize | plastid | 23.85 | 28.7 |
| Zm00001d030149_P001 | Maize | mitochondrion | 35.0 | 28.62 |
| Zm00001d009339_P001 | Maize | plastid | 33.46 | 28.06 |
| Zm00001d040322_P002 | Maize | plastid | 31.15 | 28.03 |
| Zm00001d029121_P005 | Maize | plastid | 33.46 | 25.66 |
| Zm00001d045430_P002 | Maize | plastid | 27.69 | 22.22 |
| Zm00001d039167_P001 | Maize | plastid | 25.38 | 17.01 |
Protein Annotations
| EntrezGene:100280963 | Gene3D:3.90.226.10 | MapMan:35.1 | ProteinID:AQK44940.1 | UniProt:B4FQY8 | EMBL:BT039526 |
| InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS | EMBL:EU954950 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016787 | GO:GO:0019538 | HAMAP:MF_00444 | PFAM:PF00574 |
| PRINTS:PR00127 | ScanProsite:PS00381 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF40 | MEROPS:S14.A02 |
| SUPFAM:SSF52096 | UniParc:UPI00017B799F | EnsemblPlantsGene:Zm00001d025891 | EnsemblPlants:Zm00001d025891_P001 | EnsemblPlants:Zm00001d025891_T001 | SEG:seg |
Description
ATP-dependent Clp protease proteolytic subunit
Coordinates
chr10:+:133171586..133172368
Molecular Weight (calculated)
28024.7 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.122
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRRIAAVAP RAFFSSSPPH APSLPASGYI PRREYGLVPM VIEHTSRGER AYDIFSRLLK ERIVCIHGPI TDDTASLVVA QLLFLESENP AKPVHLYINS
101: PGGVVTAGLA IYDTMQYIRS PVTTLCIGQA ASMASLLLAA GASGERRALP NARVMIHQPS GGASGQASDI AIHAKEILKV RDRLNKIYAK HTGQAIDRIE
201: QCMERDMFMD PEEAHEWGLI DEVIEHRPVS LVSDAVGSDP PNLGGGGTEV NKGTDEPSPA
101: PGGVVTAGLA IYDTMQYIRS PVTTLCIGQA ASMASLLLAA GASGERRALP NARVMIHQPS GGASGQASDI AIHAKEILKV RDRLNKIYAK HTGQAIDRIE
201: QCMERDMFMD PEEAHEWGLI DEVIEHRPVS LVSDAVGSDP PNLGGGGTEV NKGTDEPSPA
001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S
Arabidopsis Description
CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.