Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34832 | Canola | plastid | 78.09 | 50.92 |
| CDY31211 | Canola | plastid | 76.97 | 50.74 |
| CDY21009 | Canola | plastid | 76.97 | 50.74 |
| Bra031777.1-P | Field mustard | plastid | 76.97 | 50.18 |
| AT1G11750.2 | Thale cress | plastid | 75.28 | 46.37 |
| HORVU3Hr1G083440.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.54 | 42.86 |
| VIT_03s0063g02300.t01 | Wine grape | plastid | 58.43 | 38.66 |
| KRH29491 | Soybean | plastid | 57.87 | 37.73 |
| KRH24490 | Soybean | plastid | 57.3 | 37.36 |
| PGSC0003DMT400084282 | Potato | plastid | 53.37 | 34.55 |
| GSMUA_Achr8P05270_001 | Banana | plastid | 51.12 | 34.21 |
| Solyc10g051310.1.1 | Tomato | plastid | 52.81 | 34.18 |
| Os03t0411500-01 | Rice | plastid | 44.38 | 30.5 |
| TraesCS4A01G149900.1 | Wheat | plastid | 42.13 | 27.08 |
| TraesCS4D01G157200.1 | Wheat | plastid | 39.89 | 26.69 |
| EES07709 | Sorghum | plastid | 41.01 | 26.45 |
| HORVU4Hr1G038160.2 | Barley | plastid | 41.57 | 26.15 |
| TraesCS4B01G165100.1 | Wheat | plastid | 38.76 | 25.94 |
| CDX69964 | Canola | plastid | 15.17 | 18.0 |
| CDY51306 | Canola | plastid | 27.53 | 17.69 |
| CDX89962 | Canola | plastid | 29.21 | 17.69 |
| CDY15250 | Canola | plastid | 29.21 | 16.99 |
| CDY15433 | Canola | plastid | 28.65 | 16.78 |
| CDY61915 | Canola | mitochondrion | 21.35 | 16.1 |
| CDY21523 | Canola | mitochondrion | 21.35 | 15.97 |
| CDY02210 | Canola | mitochondrion | 20.22 | 15.32 |
| CDY26563 | Canola | plastid | 23.6 | 15.11 |
| CDX98066 | Canola | plastid | 23.6 | 15.05 |
| CDY30078 | Canola | plastid | 23.6 | 15.05 |
| CDY71339 | Canola | endoplasmic reticulum | 10.67 | 14.84 |
| CDY71709 | Canola | endoplasmic reticulum, extracellular | 15.17 | 14.14 |
| CDX95009 | Canola | plastid | 23.03 | 13.36 |
| CDX96137 | Canola | plastid | 21.91 | 12.46 |
| CDY36212 | Canola | plastid | 21.91 | 12.46 |
| CDY38981 | Canola | plastid | 20.22 | 12.37 |
| CDY31112 | Canola | plastid | 21.91 | 12.07 |
| CDY32150 | Canola | plastid | 21.91 | 12.0 |
| CDY39425 | Canola | plastid | 19.1 | 11.81 |
| CDY68541 | Canola | cytosol | 7.87 | 11.2 |
| CDY42955 | Canola | plastid | 19.1 | 11.15 |
| CDY09652 | Canola | plastid | 18.54 | 10.86 |
| CDY09656 | Canola | plastid | 18.54 | 10.78 |
| CDX90492 | Canola | plastid | 18.54 | 10.75 |
| CDY35605 | Canola | plastid | 17.98 | 10.56 |
| CDY69283 | Canola | plastid | 12.36 | 10.48 |
| CDY43468 | Canola | plastid | 10.11 | 10.23 |
| CDY15997 | Canola | plastid | 24.16 | 8.81 |
| CDY59367 | Canola | plastid | 18.54 | 8.51 |
| CDY03582 | Canola | plastid | 17.98 | 8.23 |
| CDY46278 | Canola | cytosol | 6.18 | 4.87 |
Protein Annotations
| Gene3D:3.90.226.10 | MapMan:35.1 | GO:A0A078H7Y7 | UniProt:A0A078H7Y7 | EnsemblPlants:CDY34630 | ProteinID:CDY34630 |
| ProteinID:CDY34630.1 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00057083001 | PFAM:PF00574 | PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF8 | SUPFAM:SSF52096 |
| UniParc:UPI0004EEA51B | SEG:seg | : | : | : | : |
Description
BnaC08g41890DATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A078H7Y7]
Coordinates
chrLK032338:-:107882..109134
Molecular Weight (calculated)
19398.1 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.169
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLTISPPL SLYFSSRTRN SKPTSYDLSH NQRNLTKRIV SALPSPYVDS LNAGLSSNVS TKIGNKDHHS IDPRSLSLFM YLTVFVSLTI KPKVGTVAFG
101: VAASQGALLL AGGTCGGCEE TRQVNEAIEA RQKIDRMYAA FTGQPLETVQ QYTERDRFLS ASEALEFGLI DGLLETEY
101: VAASQGALLL AGGTCGGCEE TRQVNEAIEA RQKIDRMYAA FTGQPLETVQ QYTERDRFLS ASEALEFGLI DGLLETEY
001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP RFGVIEAKKG NPPVMPSVMT PGGPLDLSSV
101: LFRNRIIFIG QPINAQVAQR VISQLVTLAS IDDKSDILMY LNCPGGSTYS VLAIYDCMSW IKPKVGTVAF GVAASQGALL LAGGEKGMRY AMPNTRVMIH
201: QPQTGCGGHV EDVRRQVNEA IEARQKIDRM YAAFTGQPLE KVQQYTERDR FLSASEALEF GLIDGLLETE Y
101: LFRNRIIFIG QPINAQVAQR VISQLVTLAS IDDKSDILMY LNCPGGSTYS VLAIYDCMSW IKPKVGTVAF GVAASQGALL LAGGEKGMRY AMPNTRVMIH
201: QPQTGCGGHV EDVRRQVNEA IEARQKIDRM YAAFTGQPLE KVQQYTERDR FLSASEALEF GLIDGLLETE Y
Arabidopsis Description
CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.