Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95009 | Canola | plastid | 87.5 | 36.48 |
| Bra030756.1-P | Field mustard | plastid | 89.06 | 35.29 |
| CDY31112 | Canola | plastid | 89.06 | 35.29 |
| CDY32150 | Canola | plastid | 89.06 | 35.08 |
| CDY71709 | Canola | endoplasmic reticulum, extracellular | 47.66 | 31.94 |
| VIT_14s0060g02160.t01 | Wine grape | plastid | 79.69 | 31.68 |
| KRH68514 | Soybean | plastid | 77.34 | 30.56 |
| KRG96809 | Soybean | plastid | 77.34 | 30.28 |
| AT1G09130.3 | Thale cress | plastid | 86.72 | 30.0 |
| Solyc01g099690.2.1 | Tomato | plastid | 75.78 | 29.75 |
| GSMUA_Achr3P08150_001 | Banana | plastid | 76.56 | 29.08 |
| Zm00001d029121_P005 | Maize | plastid | 68.75 | 25.96 |
| TraesCS4D01G167900.1 | Wheat | golgi, plastid | 67.97 | 25.82 |
| Os03t0344900-00 | Rice | plastid | 68.75 | 25.81 |
| OQU92609 | Sorghum | plastid | 67.97 | 25.66 |
| TraesCS4B01G154900.3 | Wheat | plastid | 67.19 | 25.52 |
| TraesCS4A01G139700.3 | Wheat | plastid | 67.19 | 25.52 |
| CDX69964 | Canola | plastid | 28.91 | 24.67 |
| HORVU4Hr1G046480.1 | Barley | plastid | 67.19 | 23.12 |
| CDY35605 | Canola | plastid | 47.66 | 20.13 |
| CDY09652 | Canola | plastid | 47.66 | 20.07 |
| CDY42955 | Canola | plastid | 47.66 | 20.0 |
| CDY09656 | Canola | plastid | 47.66 | 19.93 |
| CDX90492 | Canola | plastid | 47.66 | 19.87 |
| CDY68541 | Canola | cytosol | 18.75 | 19.2 |
| CDY46278 | Canola | cytosol | 32.03 | 18.14 |
| CDY43468 | Canola | plastid | 24.22 | 17.61 |
| CDY02210 | Canola | mitochondrion | 31.25 | 17.02 |
| CDY61915 | Canola | mitochondrion | 30.47 | 16.53 |
| CDY21523 | Canola | mitochondrion | 29.69 | 15.97 |
| CDY59367 | Canola | plastid | 42.19 | 13.92 |
| CDY39425 | Canola | plastid | 31.25 | 13.89 |
| CDY03582 | Canola | plastid | 42.19 | 13.88 |
| CDY38981 | Canola | plastid | 31.25 | 13.75 |
| CDY51306 | Canola | plastid | 29.69 | 13.72 |
| CDX98066 | Canola | plastid | 29.69 | 13.62 |
| CDY30078 | Canola | plastid | 29.69 | 13.62 |
| CDY21009 | Canola | plastid | 28.12 | 13.33 |
| CDY31211 | Canola | plastid | 28.12 | 13.33 |
| CDY26563 | Canola | plastid | 28.91 | 13.31 |
| CDY34832 | Canola | plastid | 28.12 | 13.19 |
| CDX89962 | Canola | plastid | 29.69 | 12.93 |
| CDY36212 | Canola | plastid | 31.25 | 12.78 |
| CDY15433 | Canola | plastid | 29.69 | 12.5 |
| CDX96137 | Canola | plastid | 30.47 | 12.46 |
| CDY15250 | Canola | plastid | 29.69 | 12.42 |
| CDY69283 | Canola | plastid | 18.75 | 11.43 |
| CDY34630 | Canola | plastid | 14.84 | 10.67 |
| CDY15997 | Canola | plastid | 28.91 | 7.58 |
Protein Annotations
| Gene3D:3.90.226.10 | MapMan:35.1 | GO:A0A078JXA2 | UniProt:A0A078JXA2 | EnsemblPlants:CDY71339 | ProteinID:CDY71339 |
| ProteinID:CDY71339.1 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00014210001 | PFAM:PF00574 | PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF6 | SUPFAM:SSF52096 |
| UniParc:UPI0004EEA85F | : | : | : | : | : |
Description
BnaAnng37020DATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A078JXA2]
Coordinates
chrLK045438:+:1168..2144
Molecular Weight (calculated)
13990.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.287
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVLVVTEM PVYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH TVCMGAAIGH ACLLLSVGTK GKRFMMPHSK AMIQQPRVPS SGLMPASDVL
101: IRAEEFITNM DILVGLLSKH IGNLYKLL
101: IRAEEFITNM DILVGLLSKH IGNLYKLL
001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV
Arabidopsis Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.