Factsheet for Bra031777.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34832	Canola	plastid	98.9	98.9
Bra016816.1-P	Field mustard	plastid	93.77	94.81
AT1G11750.2	Thale cress	plastid	92.31	87.2
CDY34630	Canola	plastid	50.18	76.97
VIT_03s0063g02300.t01	Wine grape	plastid	70.33	71.38
KRH29491	Soybean	plastid	71.06	71.06
KRH24490	Soybean	plastid	70.7	70.7
GSMUA_Achr8P05270_001	Banana	plastid	68.5	70.3
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.78	70.13
PGSC0003DMT400084282	Potato	plastid	66.67	66.18
Solyc10g051310.1.1	Tomato	plastid	66.3	65.82
Os03t0411500-01	Rice	plastid	58.97	62.16
TraesCS4D01G157200.1	Wheat	plastid	55.31	56.77
EES07709	Sorghum	plastid	56.78	56.16
TraesCS4B01G165100.1	Wheat	plastid	54.58	56.02
TraesCS4A01G149900.1	Wheat	plastid	56.78	55.96
HORVU4Hr1G038160.2	Barley	plastid	56.04	54.06
Bra009331.1-P	Field mustard	mitochondrion	27.47	31.51
Bra013020.1-P	Field mustard	mitochondrion	26.37	30.64
Bra033332.1-P	Field mustard	plastid	32.23	29.93
Bra030504.1-P	Field mustard	plastid	30.77	28.09
Bra025079.1-P	Field mustard	plastid	27.84	26.39
Bra019764.1-P	Field mustard	plastid	26.37	25.81
Bra004177.1-P	Field mustard	plastid	29.3	25.56
Bra040108.1-P	Field mustard	plastid	24.91	22.3
Bra030756.1-P	Field mustard	plastid	26.37	22.29
Bra012683.1-P	Field mustard	plastid	24.54	21.82
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.27	17.65
Bra014229.1-P	Field mustard	plastid	22.34	15.72

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra031777	EnsemblPlants:Bra031777.1	EnsemblPlants:Bra031777.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
UniProt:M4ESJ8	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00382	PANTHER:PTHR10381
PANTHER:PTHR10381:SF8	SUPFAM:SSF52096	UniParc:UPI00025430CD	SEG:seg	:	:

Description

AT1G11750 (E=3e-128) CLPP6, NCLPP1, NCLPP6 | CLPP6; serine-type endopeptidase

Coordinates

chrA09:-:34774486..34775982

Molecular Weight (calculated)

29550.6 Da

IEP (calculated)

9.050

GRAVY (calculated)

-0.130

Length

273 amino acids

Sequence
(BLAST)

001: MAGLTISPPL GLSFSSQTRN AKPTSYLSHN QRNLTSRIVS ALPSPYGDSL KAGLSGNVST KIGNKDHRSI DQRFGVIEAK KGNPPVMPSV MTPGGPLDLS
101: SVLFRNRIIF IGQPINAQVA QRVISQLVTL ASIDDKSDIL IYLNCPGGST YSVLAIYDCM SWIKPKVGTV AFGVAASQGA LLLAGGEKGM RYAMPNTRVM
201: IHQPQTGCGG HVEDVRRQVN EAIEARQKID RMYAAFTGQA LETVQQYTER DRFLSASEAL EFGLIDGLLE TEY

Best Arabidopsis Sequence Match ( AT1G11750.1 )
(BLAST)

001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP RFGVIEAKKG NPPVMPSVMT PGGPLDLSSV
101: LFRNRIIFIG QPINAQVAQR VISQLVTLAS IDDKSDILMY LNCPGGSTYS VLAIYDCMSW IKPKVGTVAF GVAASQGALL LAGGEKGMRY AMPNTRVMIH
201: QPQTGCGGHV EDVRRQVNEA IEARQKIDRM YAAFTGQPLE KVQQYTERDR FLSASEALEF GLIDGLLETE Y

Arabidopsis Description

CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.