Factsheet for TraesCS3A01G187300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G216800.1	Wheat	plastid	98.95	98.95
HORVU3Hr1G038610.4	Barley	plastid	91.58	91.9
TraesCS3D01G191100.2	Wheat	plastid	99.3	90.42
Zm00001d040322_P002	Maize	plastid	84.91	83.74
EES00561	Sorghum	plastid	84.91	83.16
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	83.86	80.2
CDY71709	Canola	endoplasmic reticulum, extracellular	52.28	78.01
VIT_00s0204g00220.t01	Wine grape	plastid	64.21	62.67
CDY42955	Canola	plastid	65.26	60.98
Bra040108.1-P	Field mustard	plastid	64.91	60.66
KRH04225	Soybean	plastid	64.56	60.53
KRH57519	Soybean	plastid	64.56	60.53
CDY09652	Canola	plastid	64.21	60.2
CDY35605	Canola	plastid	63.86	60.07
CDY09656	Canola	plastid	64.21	59.8
CDX90492	Canola	plastid	64.21	59.61
PGSC0003DMT400067452	Potato	plastid	63.16	59.6
AT4G17040.1	Thale cress	plastid	63.51	59.34
Bra012683.1-P	Field mustard	plastid	63.86	59.28
Solyc08g077890.2.1	Tomato	plastid	62.11	58.61
VIT_00s0309g00040.t01	Wine grape	endoplasmic reticulum	31.93	57.23
VIT_00s0309g00080.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	32.98	55.62
GSMUA_Achr8P14970_001	Banana	mitochondrion	47.02	54.69
CDY43468	Canola	plastid	27.02	43.75
TraesCS4A01G139700.3	Wheat	plastid	36.49	30.86
TraesCS6A01G220500.1	Wheat	plastid	28.77	27.33
TraesCS4A01G121500.1	Wheat	plastid	25.61	25.89
TraesCS1A01G111400.1	Wheat	cytosol	10.18	25.44
TraesCS3A01G197900.1	Wheat	plastid	26.32	24.43
TraesCS1A01G198400.1	Wheat	plastid	24.56	23.65
TraesCS1A01G437500.2	Wheat	plastid	31.93	23.51
TraesCS4A01G149900.1	Wheat	plastid	21.4	22.02
TraesCS7A01G076400.1	Wheat	plastid	22.81	21.67
TraesCS4A01G374600.2	Wheat	plastid	22.81	20.57
TraesCS3A01G215600.1	Wheat	cytosol	11.93	18.48

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	InterPro:BEACH_dom	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000409	PFAM:PF00574	PRINTS:PR00127
PFscan:PS50197	PANTHER:PTHR10381	PANTHER:PTHR10381:SF25	SUPFAM:SSF52096	EnsemblPlantsGene:TraesCS3A01G187300	EnsemblPlants:TraesCS3A01G187300.1
TIGR:cd07017	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:223521249..223533758

Molecular Weight (calculated)

31309.3 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.044

Length

285 amino acids

Sequence
(BLAST)

001: MEAVAALDAR ALFSPPTALP SSPSPHLRLA ARPRALAASP AFVAATPKQR FLTPHPDPAG GRGTRDVVAM VIPFLRGTAF EQPPPDLASF LYKNRIVYLG
101: MCLVPSVTEL MLAEFLYLQY EDAEKPIYMY INSTGTTKNG EKLGYETEAF AVYDAMRYVK IPIFTLCIGN AWGEAALLLA AGAKGNRAAL PSSTIMMKQP
201: IGRFQGQATD VDIARKEIRN VKIEMVKLLS RHIGKPMEEI ARDIRRPKYF SPSEAVDYGI IDKVLHNVKS QTDAGLVSEV KKELI

Best Arabidopsis Sequence Match ( AT4G17040.1 )
(BLAST)

001: MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI

Arabidopsis Description

CLPR4ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V785]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.