Factsheet for Os03t0308100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047634_P002	Maize	cytosol	78.37	93.64
EER92371	Sorghum	plastid	92.2	91.87
TraesCS4D01G184400.1	Wheat	plastid	89.36	89.36
TraesCS4A01G121500.1	Wheat	plastid	88.65	88.65
TraesCS4B01G181600.1	Wheat	plastid	88.65	88.65
HORVU4Hr1G053660.1	Barley	plastid	89.36	82.35
Zm00001d028895_P001	Maize	plastid	90.43	81.47
Bra033332.1-P	Field mustard	plastid	71.99	69.05
CDX89962	Canola	plastid	71.99	69.05
CDY51306	Canola	plastid	67.02	68.23
AT1G02560.1	Thale cress	plastid	71.99	68.12
VIT_07s0005g01530.t01	Wine grape	plastid	68.79	67.13
GSMUA_Achr8P22320_001	Banana	plastid	71.28	67.0
KRH31786	Soybean	nucleus, plastid	71.63	66.67
Solyc01g100520.2.1	Tomato	plastid	70.57	66.56
KRH69210	Soybean	nucleus, plastid	73.05	66.24
CDY15250	Canola	plastid	71.28	65.69
Bra030504.1-P	Field mustard	plastid	68.79	64.88
CDY15433	Canola	plastid	68.79	63.82
KRH68271	Soybean	plastid	59.57	55.81
Os02t0634500-01	Rice	plastid	41.49	39.26
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	70.57	35.28
Os04t0525600-01	Rice	mitochondrion	38.3	34.95
Os01t0507900-01	Rice	plastid	37.23	33.44
Os10t0580800-01	Rice	plastid	34.04	32.76
Os03t0411500-01	Rice	plastid	29.08	31.66
CAA33972	Rice	cytosol	24.11	31.48
Os06t0136800-01	Rice	plastid	28.72	27.27
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	26.95	25.5
Os03t0344900-00	Rice	plastid	25.53	21.11
Os05t0592100-01	Rice	plastid	25.18	18.39

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EntrezGene:4332615	EMBL:AB116073	ProteinID:ABF95546.1	EMBL:AK060518
EMBL:AK105977	ProteinID:BAF11816.2	ProteinID:BAS83831.1	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538
HAMAP:MF_00444	EnsemblPlantsGene:Os03g0308100	EnsemblPlants:Os03t0308100-01	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381
ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12	UniProt:Q50LH5	SUPFAM:SSF52096	UniParc:UPI000050BCAC
RefSeq:XP_015628263.1	SEG:seg	:	:	:	:

Description

CHLOROPLAST PROTEASE 5Peptidase S14, ClpP family protein. (Os03t0308100-01);Peptidase S14, ClpP family protein. (Os03t0308100-02);Peptidase S14, ClpP family protein. (Os03t0308100-03)

Coordinates

chr3:-:10966803..10969767

Molecular Weight (calculated)

30398.6 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.148

Length

282 amino acids

Sequence
(BLAST)

001: MATTTTTPSS SLTAPLLRPS SNANPAPRSL PLLRSRRCAR AVATAAAAAG HGAAHQRSGI WSIRDDLVVP RSPYFPVEYA SGQERGPSPM VMERFQSVVS
101: QLFQHRIIRC GGPVEDDMAN IIVAQLLYLD AIDPNKDIIM YVNSPGGSVT AGMAIFDTMK HIRPDVSTVC IGLAASMGAF LLSAGTKGKR YSLPNSRIMI
201: HQPLGGAQGQ ETDLEIQANE MLHHKANLNG YLAYHTGQPL DKINVDTDRD YFMSAKEAKE YGLIDGVIMN PLKALQPLPA SS

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.