Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19826 | Canola | mitochondrion | 87.46 | 99.03 |
| Bra009790.1-P | Field mustard | mitochondrion | 87.24 | 93.08 |
| AT5G24710.1 | Thale cress | mitochondrion | 88.88 | 90.56 |
| Bra010799.1-P | Field mustard | cytosol | 16.82 | 76.87 |
| Bra028077.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, plastid | 6.2 | 50.88 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | EnsemblPlantsGene:Bra036523 | EnsemblPlants:Bra036523.1 | EnsemblPlants:Bra036523.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M4F614 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR45521 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI0002541C76 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
AT5G24710 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like (InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336 species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794; Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI BLink).
Coordinates
chrA09:-:1565118..1572190
Molecular Weight (calculated)
150935.0 Da
IEP (calculated)
5.929
GRAVY (calculated)
-0.202
Length
1403 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLRARAFRQT NNKIVKIQVH PTHPWLVTAD DTDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG DSDYKGKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVDHLT SGFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKS ELDNRSLVCM EFLTRSSAGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTAG HKGSIYCLMN FMASSGEALL VSGGSDGLLI LWNADHGTDS RDLVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHKKL RVFCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAFLP ALSGSRDNSA VYIFGRELKL LNFQISNTAN PPLGNNALSE SGMSKLDAGE QLTVKQTKKK GVATVPHDSY SVLSVSSSGK YVAVVWPDIL
0501: YFSIYKVSDW SIVDSGSARI LAWDTCRDRF AILESVLPQR MPMIPKGGSS RKAKEAAAAA AQAAAAANAA SSASVQVRIL LDDGTSNILM RSVGGRSEPV
0601: IGLHGGALLG IGYRTSRRIS PVSATAISTI QSMPLSGFGN SNVSSFSSYD DGSSQRSTES APLNYQLYSW ENFEPVGGML PQPEWTAWDK TVEYCAFAYQ
0701: QYMVISSLRP QYRYLGNVAI SHATGAVWHR RQLFVATQTT IECVFVDAGV TEIDIETRKM KEEMKLKEAQ ARAVAEHGEL ALITVEGAQS SKQEMISLRA
0801: PLLQVVRLAS FQNAPSVPPF LSLPRQSRGD GDDMDERRAS EVAVGGGGVS VADTRFPVEQ KRPVGPLVVA GVRDGVLWLI DRYMCAHAIS LNHPGIRCRC
0901: LAAYGDAISA VKWASRLGRE HHDDLAQFML GMGYATEALH LPGISKRLEF DLAMQSNDLK RALHCLLTMS NSRDIGQDGL GLDLSDILSL TAEKKEDVVE
1001: AVEGIVKFAK EFLDLIDAAD ATGNADVARE ALKRLATAGS VKGALQGHEL RGLSLRLANH GELTRLSGLI NNLISIGLGR ESAFSAAVLG DNALMEKAWQ
1101: DTGMLAEAVL HAHAHGRPSL KNLVQAWNKT LQKEIEQVSS TKTDAASAFL ASLEDPKLTS LSDASKKPPI EILPPGMSSI FASISAPKKP LPTMKTPQPE
1201: PTKPLAIEEP AKPLAIEAPP PSSEETPQTE SAPETATDPE SAAPETAADP ESAAPETAAD SEPAEPETAA AAESAAPETA SAAESAAPET AAVTEPAAPE
1301: TAAVAESAAA HVDGPVTETV PEPPAPEKEE TSLEDKSDPS SIQKTETAVA TEDNSQTMPP PPPPEITTTT TTVKPTENAA TERPQVTYPP IRSQPIDFDF
1401: LND
0101: QLWRNRSAAA ESPSAVDHLT SGFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKS ELDNRSLVCM EFLTRSSAGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTAG HKGSIYCLMN FMASSGEALL VSGGSDGLLI LWNADHGTDS RDLVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHKKL RVFCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAFLP ALSGSRDNSA VYIFGRELKL LNFQISNTAN PPLGNNALSE SGMSKLDAGE QLTVKQTKKK GVATVPHDSY SVLSVSSSGK YVAVVWPDIL
0501: YFSIYKVSDW SIVDSGSARI LAWDTCRDRF AILESVLPQR MPMIPKGGSS RKAKEAAAAA AQAAAAANAA SSASVQVRIL LDDGTSNILM RSVGGRSEPV
0601: IGLHGGALLG IGYRTSRRIS PVSATAISTI QSMPLSGFGN SNVSSFSSYD DGSSQRSTES APLNYQLYSW ENFEPVGGML PQPEWTAWDK TVEYCAFAYQ
0701: QYMVISSLRP QYRYLGNVAI SHATGAVWHR RQLFVATQTT IECVFVDAGV TEIDIETRKM KEEMKLKEAQ ARAVAEHGEL ALITVEGAQS SKQEMISLRA
0801: PLLQVVRLAS FQNAPSVPPF LSLPRQSRGD GDDMDERRAS EVAVGGGGVS VADTRFPVEQ KRPVGPLVVA GVRDGVLWLI DRYMCAHAIS LNHPGIRCRC
0901: LAAYGDAISA VKWASRLGRE HHDDLAQFML GMGYATEALH LPGISKRLEF DLAMQSNDLK RALHCLLTMS NSRDIGQDGL GLDLSDILSL TAEKKEDVVE
1001: AVEGIVKFAK EFLDLIDAAD ATGNADVARE ALKRLATAGS VKGALQGHEL RGLSLRLANH GELTRLSGLI NNLISIGLGR ESAFSAAVLG DNALMEKAWQ
1101: DTGMLAEAVL HAHAHGRPSL KNLVQAWNKT LQKEIEQVSS TKTDAASAFL ASLEDPKLTS LSDASKKPPI EILPPGMSSI FASISAPKKP LPTMKTPQPE
1201: PTKPLAIEEP AKPLAIEAPP PSSEETPQTE SAPETATDPE SAAPETAADP ESAAPETAAD SEPAEPETAA AAESAAPETA SAAESAAPET AAVTEPAAPE
1301: TAAVAESAAA HVDGPVTETV PEPPAPEKEE TSLEDKSDPS SIQKTETAVA TEDNSQTMPP PPPPEITTTT TTVKPTENAA TERPQVTYPP IRSQPIDFDF
1401: LND
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.