Factsheet for GSMUA_AchrUn_randomP13980_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022642	Potato	cytosol	56.76	44.68
KRH34211	Soybean	cytosol	57.66	20.51
CDY23885	Canola	cytosol	35.14	17.57
KRG92577	Soybean	cytosol	63.06	8.83
CDY22472	Canola	cytosol	63.06	8.78
CDY35443	Canola	cytosol	63.06	8.78
Bra000201.1-P	Field mustard	cytosol	63.06	8.78
CDY06969	Canola	cytosol	61.26	8.58
KRH40335	Soybean	cytosol	61.26	8.58
Bra016976.1-P	Field mustard	cytosol	61.26	8.54
AT2G40730.1	Thale cress	cytosol	61.26	8.52
KRH00899	Soybean	cytosol	60.36	8.48
CDX93162	Canola	cytosol	58.56	8.18
Solyc05g052200.2.1	Tomato	nucleus	58.56	7.95
Solyc06g048890.2.1	Tomato	cytosol	58.56	7.89
VIT_13s0067g03110.t01	Wine grape	mitochondrion	61.26	7.69
Zm00001d014830_P001	Maize	cytosol, peroxisome, plasma membrane	10.81	4.71
CDY23884	Canola	cytosol, extracellular, plastid	5.41	3.77
Zm00001d004670_P001	Maize	cytosol	9.91	3.53
GSMUA_Achr3P25170_001	Banana	cytosol	16.22	1.95
PGSC0003DMT400030435	Potato	plastid	1.8	0.8
GSMUA_AchrUn_...	Banana	cytosol	5.41	0.79
PGSC0003DMT400042962	Potato	plastid	1.8	0.78
GSMUA_Achr8P04250_001	Banana	nucleus	0.9	0.47
KRG88859	Soybean	cytosol, peroxisome, plastid	0.9	0.4
CDY04778	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP13980_001	EnsemblPlants:GSMUA_AchrUn_randomT13980_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG13980_001	Gene3D:3.30.200.20	PANTHER:PTHR12984	PANTHER:PTHR12984:SF3
SEG:seg	UniParc:UPI0002948C6C	UniProt:M0U907	MapMan:35.2	:	:

Description

Putative uncharacterized protein At2g40730 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13980_001]

Coordinates

chrchrUn_random:-:65791212..65794799

Molecular Weight (calculated)

12099.4 Da

IEP (calculated)

10.533

GRAVY (calculated)

-0.343

Length

111 amino acids

Sequence
(BLAST)

001: MFKFLKGVVG GSGTGPKDLP YNIGEPYPSA WGSWTHQRGT SKEDGSSVSI FSLSGSSSQD GHLAAGRNGV KRLRTVNYST FTCRFQSPTH LALDRMMPLQ
101: CLLLIFSTRR G

Best Arabidopsis Sequence Match ( AT2G40730.1 )
(BLAST)

001: MFKFLKGVVA GSGTGLKDLP YNIGDPYPSA WGSWSHFRGT SKDDGSPVSI FALSGNNAQD GHLAAGRNGV KRLRTVRHPN ILSFLHSTEV ETHDGSTTKV
101: TIYIVTEPVM PLSDKIKELG LKATQRDEYF ALGLHQIGKA VSFLNNDCKL VHGNVCLASV VVTPTLDWKL HALDVLSEFD GSNESASGPM LPYEWLVGTQ
201: YKPMEMVKSD WVAIRKSPPW AIDSWGLGCL IYELFSGSKL AKTEELRNTV GIPKSLLPDY QRLLSSMPSR RLNTSKLLEN GEYFQNKLVD TIHFMDILNL
301: KDSVEKDTFF RKLPNVAEQL PREIVLKKLL PLLASSLEFG SAAAPALTAL LKMGSWLSTE DFSVKVLPTI VKLFASNDRA IRVSLLQHVD QFGESMSGQI
401: VDEQVYPHVA TGFADTSAFL RELTLKSMLV LAPKLSQRTL SGSLLKYLSK LQVDEEPAIR TNTTILLGNI ATYLNEGTRK RVLINAFTVR ALRDTFPPAR
501: GAGIVALCAT STTYDDTEIA TRILPNIVVL TIDQDSDVRS KAFQAVEQFL QILKQNYEKT NAGEIGASGG ASAIPETAGL IGWAMSSLTL KGKPLEQAPL
601: ASSSSAPSLA AAASNATSTA TEAPSVKASH HTRSNSDFTD QPAPPSPTST DGWGDAENGI SEGHESDKDG WDLEPLDEPK PSPALANIQA AQKRPVSQSS
701: RPSAATSSRP KISTVKAAAK TEDDDLWGSI AAPPPATTSR PLNVKKTVQS DDEDPWAAIA APPPTTRAKP LSSGRGRGAK PAALKLGAQR INRTSSGM

Arabidopsis Description

Kinase family with ARM repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4II29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.