Factsheet for Solyc05g052200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g048890.2.1	Tomato	cytosol	81.54	80.95
PGSC0003DMT400022642	Potato	cytosol	13.45	78.01
CDY23884	Canola	cytosol, extracellular, plastid	14.91	76.73
CDY23885	Canola	cytosol	20.17	74.32
KRG92577	Soybean	cytosol	72.0	74.27
AT2G40730.1	Thale cress	cytosol	72.25	74.06
KRH00899	Soybean	cytosol	71.52	74.05
KRH40335	Soybean	cytosol	71.03	73.27
CDY35443	Canola	cytosol	70.78	72.65
Bra016976.1-P	Field mustard	cytosol	70.66	72.61
CDX93162	Canola	cytosol	70.54	72.58
Bra000201.1-P	Field mustard	cytosol	70.54	72.4
CDY22472	Canola	cytosol	70.54	72.4
CDY06969	Canola	cytosol	70.05	72.26
VIT_13s0067g03110.t01	Wine grape	mitochondrion	78.0	72.17
PGSC0003DMT400030435	Potato	plastid	21.64	71.08
Os01t0819900-01	Rice	cytosol, plasma membrane	69.56	68.97
TraesCS3D01G336800.1	Wheat	cytosol	69.19	68.69
EES03802	Sorghum	cytosol	69.07	68.57
TraesCS3B01G375000.1	Wheat	cytosol	68.95	68.45
KRH34211	Soybean	cytosol	25.18	66.03
KRG88859	Soybean	cytosol, peroxisome, plastid	19.56	64.52
HORVU3Hr1G080820.2	Barley	cytosol, plastid	69.07	61.48
TraesCS3A01G342800.1	Wheat	cytosol	69.07	61.21
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	7.95	58.56
PGSC0003DMT400042962	Potato	plastid	16.01	51.37
Zm00001d014830_P001	Maize	cytosol, peroxisome, plasma membrane	5.5	17.65
Zm00001d004670_P001	Maize	cytosol	6.36	16.67
Solyc11g042990.1.1	Tomato	plastid	17.73	15.52
CDY04778	Canola	cytosol	2.08	1.72

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.10.10	Gene3D:3.30.200.20	MapMan:35.2	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:HEAT_type_2	InterPro:IPR000719	InterPro:IPR011989	InterPro:IPR021133
UniProt:K4C1Q1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PFscan:PS50077	PANTHER:PTHR12984
PANTHER:PTHR12984:SF3	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF48371	SUPFAM:SSF56112	EnsemblPlantsGene:Solyc05g052200.2
EnsemblPlants:Solyc05g052200.2.1	UniParc:UPI0002765B15	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:62472113..62488348

Molecular Weight (calculated)

88592.0 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.276

Length

818 amino acids

Sequence
(BLAST)

001: MLNFLKGVVS GSGTGLKDLP YNIGEPYSSA WGSWIHYRGT SKDDGTPVSV FALSGSSTND GHLAAGRNGV KRLRTVRHPN ILSFLHSTEA ENFDGSSAKV
101: TIYIVTEPVM PLAEKLKELG LKGTQRDEYY AWGLHRIAKA VSFLNNDCKL VHGNVCLASV VVTQTLDWKL HAFDVLSEFD GHNESAVGPM LQYDWLIGAQ
201: YKSKELLKSD WTTIRKSPPW TIDSWGLGCL IYELFSGTKL SKTEDLCNTA SIPKSLLPDY QRLLSSMPPR RLNSSKLLEN SEYFQNKLVE TIQFMEILNL
301: KDSVEKDTFF RKLPNLAEQL PREIVLKKLL PLLASALEFG SAAAPALTAL LKMGSWLSTD EFSVKVLPTI IKLFASNDRS IRVGLLQHID QYGESLSAKI
401: VEEQVYAHVA TGFSDTSAFL RELTLKSMLV LAPKLSHRTI SGSLLKYLSK LQVDEEPAIR TNTTILLGNI AGYLNEGTRK RVLINALTVR ALRDTFAPAR
501: AAGIMALSAT SSYYDVTEIA TRILPNIVVF TIDPDSDVQS KAFEAVDQFL QLVKQHHEKT NTGDTSTTSM GTSSIPGNAS LLGWAMSSLT LKGGKSSEQG
601: SYAPASSSMP PSAVPNSSSI ADSSSITPIH VSSSSDMTDQ HVSVSPSLND GWGELENGLE GLDGDKDGWD DIEPQEEPKP SPFLANIQAA QKRPVSQPKP
701: QVASLRGSIK NDDEDPWGSV PATAPAPRTS SQPSSTRSSR TVDDDEDPWG AISAPAPSAK SSLNVKKGGS LDANDPWAAI AAPVPTSKAR SSIGRGRGNK
801: PTVPKLGAQR INRTSSGM

Best Arabidopsis Sequence Match ( AT2G40730.1 )
(BLAST)

001: MFKFLKGVVA GSGTGLKDLP YNIGDPYPSA WGSWSHFRGT SKDDGSPVSI FALSGNNAQD GHLAAGRNGV KRLRTVRHPN ILSFLHSTEV ETHDGSTTKV
101: TIYIVTEPVM PLSDKIKELG LKATQRDEYF ALGLHQIGKA VSFLNNDCKL VHGNVCLASV VVTPTLDWKL HALDVLSEFD GSNESASGPM LPYEWLVGTQ
201: YKPMEMVKSD WVAIRKSPPW AIDSWGLGCL IYELFSGSKL AKTEELRNTV GIPKSLLPDY QRLLSSMPSR RLNTSKLLEN GEYFQNKLVD TIHFMDILNL
301: KDSVEKDTFF RKLPNVAEQL PREIVLKKLL PLLASSLEFG SAAAPALTAL LKMGSWLSTE DFSVKVLPTI VKLFASNDRA IRVSLLQHVD QFGESMSGQI
401: VDEQVYPHVA TGFADTSAFL RELTLKSMLV LAPKLSQRTL SGSLLKYLSK LQVDEEPAIR TNTTILLGNI ATYLNEGTRK RVLINAFTVR ALRDTFPPAR
501: GAGIVALCAT STTYDDTEIA TRILPNIVVL TIDQDSDVRS KAFQAVEQFL QILKQNYEKT NAGEIGASGG ASAIPETAGL IGWAMSSLTL KGKPLEQAPL
601: ASSSSAPSLA AAASNATSTA TEAPSVKASH HTRSNSDFTD QPAPPSPTST DGWGDAENGI SEGHESDKDG WDLEPLDEPK PSPALANIQA AQKRPVSQSS
701: RPSAATSSRP KISTVKAAAK TEDDDLWGSI AAPPPATTSR PLNVKKTVQS DDEDPWAAIA APPPTTRAKP LSSGRGRGAK PAALKLGAQR INRTSSGM

Arabidopsis Description

Kinase family with ARM repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4II29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.