Factsheet for VIT_13s0067g03110.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00899	Soybean	cytosol	73.3	82.03
KRH40335	Soybean	cytosol	73.42	81.84
KRG92577	Soybean	cytosol	73.19	81.59
CDY23884	Canola	cytosol, extracellular, plastid	14.48	80.5
AT2G40730.1	Thale cress	cytosol	72.17	79.95
PGSC0003DMT400022642	Potato	cytosol	12.67	79.43
CDY35443	Canola	cytosol	71.15	78.92
CDY22472	Canola	cytosol	70.93	78.67
Solyc06g048890.2.1	Tomato	cytosol	73.08	78.4
Bra000201.1-P	Field mustard	cytosol	70.36	78.04
Solyc05g052200.2.1	Tomato	nucleus	72.17	78.0
CDX93162	Canola	cytosol	69.91	77.74
Bra016976.1-P	Field mustard	cytosol	69.8	77.51
CDY06969	Canola	cytosol	69.0	76.92
CDY23885	Canola	cytosol	19.0	75.68
KRH34211	Soybean	cytosol	25.91	73.4
KRG88859	Soybean	cytosol, peroxisome, plastid	20.14	71.77
EES03802	Sorghum	cytosol	66.86	71.72
Os01t0819900-01	Rice	cytosol, plasma membrane	66.86	71.64
TraesCS3B01G375000.1	Wheat	cytosol	66.18	71.0
TraesCS3D01G336800.1	Wheat	cytosol	66.18	71.0
HORVU3Hr1G080820.2	Barley	cytosol, plastid	66.86	64.31
TraesCS3A01G342800.1	Wheat	cytosol	66.86	64.03
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	7.69	61.26
PGSC0003DMT400042962	Potato	plastid	13.69	47.45
PGSC0003DMT400030435	Potato	plastid	12.1	42.97
Zm00001d014830_P001	Maize	cytosol, peroxisome, plasma membrane	5.2	18.04
Zm00001d004670_P001	Maize	cytosol	5.77	16.35
VIT_18s0089g00030.t01	Wine grape	cytosol	16.97	16.11

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.10.10	EntrezGene:100263836	wikigene:100263836	Gene3D:3.30.200.20	MapMan:35.2
EMBL:AM455676	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:CAN63376	ProteinID:CAN63376.1	ProteinID:CCB49781
ProteinID:CCB49781.1	UniProt:F6HC35	EMBL:FN595514	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:HEAT_type_2
InterPro:IPR000719	InterPro:IPR011989	InterPro:IPR021133	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100263836	wikigene:LOC100263836
PFAM:PF00069	PFscan:PS50011	PFscan:PS50077	PANTHER:PTHR12984	PANTHER:PTHR12984:SF3	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF48371	SUPFAM:SSF56112	UniParc:UPI000210A108	ArrayExpress:VIT_13s0067g03110	EnsemblPlantsGene:VIT_13s0067g03110
EnsemblPlants:VIT_13s0067g03110.t01	RefSeq:XP_002280870	RefSeq:XP_002280870.1	RefSeq:XP_002280879	RefSeq:XP_002280879.1	RefSeq:XP_003633430
RefSeq:XP_003633430.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:-:1685267..1712417

Molecular Weight (calculated)

96476.5 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.336

Length

884 amino acids

Sequence
(BLAST)

001: MFSNRSKFNG RHDQATARRL KSGRLQRNTQ HREALNNNHY NSVFSTFASE SERERIIELE FRNFSEKIEE GGRGRGRDSG GLICLWDRSK MLKFLKGVVA
101: GSGAGLKDLP YNIGEPYSSA WGSWTHSRGT SKDDGSPVSI FSLSGSNAQD GHLAAGRNGV KRLRTVRHPN ILSFLHSTEA ETFDGSSTKV TIYIVTEPVM
201: PLSEKIKELG LEGTQRDEYY AWGLHQIAKA VSFLNNDCKL VHGNVCLASV VVTQTLDWKL HAFDVLSEFD GHSEAATGPL LQYEWLVGSQ YKPMELLKSD
301: WAAIRKSPPW AIDSWGLGCL IYELFSGMRL GKTEELRNTA SIPKSLLPDY QRLLSSMPAR RLNTSKLIEN SEYFQNKLVD TIHFMDILNL KDSVEKDTFF
401: RKLPNLAEQL PRQIVLKKLL PMLASALEFG SAAAPALTAL LKMASWLSAE DFSAKVLPTI VKLFASNDRA IRVGLLQHID QYGESLSAQI VDEQVYTHVA
501: TGFSDTSAFL RELTLKSMLI LAPKLSQRTI SGSLLKYLSK LQVDEEPAIR TNTTILLGNI ASYLNEGTRK RVLINAFTVR ALRDTFSPAR GAGVMALCAT
601: SSYYDITEIA TRILPNVVVL TIDPDSDVRS KAFQAVDQFL QIVKQYHEKT NAGDTTGSSM GISSIPGNAS LLGWAMSSLT LKSKPSEQAP LAPANSSAPL
701: ASASSNDSSV MDTATPASIN VSSPTDFSDQ AVPASPTSTD GWGELENGIH EEHESDKDGW DDIEPLEEPK PPSALANIQA AQKRPVSQPK PQVPSRPKIP
801: PKVSKDEDDD LWGSIAAPAP KTASKPLNVK TAGAVDNDDP WAAIAAPPPT TRAKPLSAGR GRGAKPAAPK LGAQRINRTS SSGM

Best Arabidopsis Sequence Match ( AT2G40730.1 )
(BLAST)

001: MFKFLKGVVA GSGTGLKDLP YNIGDPYPSA WGSWSHFRGT SKDDGSPVSI FALSGNNAQD GHLAAGRNGV KRLRTVRHPN ILSFLHSTEV ETHDGSTTKV
101: TIYIVTEPVM PLSDKIKELG LKATQRDEYF ALGLHQIGKA VSFLNNDCKL VHGNVCLASV VVTPTLDWKL HALDVLSEFD GSNESASGPM LPYEWLVGTQ
201: YKPMEMVKSD WVAIRKSPPW AIDSWGLGCL IYELFSGSKL AKTEELRNTV GIPKSLLPDY QRLLSSMPSR RLNTSKLLEN GEYFQNKLVD TIHFMDILNL
301: KDSVEKDTFF RKLPNVAEQL PREIVLKKLL PLLASSLEFG SAAAPALTAL LKMGSWLSTE DFSVKVLPTI VKLFASNDRA IRVSLLQHVD QFGESMSGQI
401: VDEQVYPHVA TGFADTSAFL RELTLKSMLV LAPKLSQRTL SGSLLKYLSK LQVDEEPAIR TNTTILLGNI ATYLNEGTRK RVLINAFTVR ALRDTFPPAR
501: GAGIVALCAT STTYDDTEIA TRILPNIVVL TIDQDSDVRS KAFQAVEQFL QILKQNYEKT NAGEIGASGG ASAIPETAGL IGWAMSSLTL KGKPLEQAPL
601: ASSSSAPSLA AAASNATSTA TEAPSVKASH HTRSNSDFTD QPAPPSPTST DGWGDAENGI SEGHESDKDG WDLEPLDEPK PSPALANIQA AQKRPVSQSS
701: RPSAATSSRP KISTVKAAAK TEDDDLWGSI AAPPPATTSR PLNVKKTVQS DDEDPWAAIA APPPTTRAKP LSSGRGRGAK PAALKLGAQR INRTSSGM

Arabidopsis Description

Kinase family with ARM repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4II29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.