Factsheet for VIT_18s0089g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04777	Canola	cytosol	65.52	68.31
CDY03692	Canola	cytosol	65.74	68.3
Bra007977.1-P	Field mustard	cytosol	65.31	67.86
CDX96321	Canola	cytosol	63.7	67.62
CDX72804	Canola	cytosol	63.91	67.54
CDY37942	Canola	cytosol	65.2	67.44
Bra024544.1-P	Field mustard	cytosol	65.84	67.36
KRH27546	Soybean	extracellular	66.81	67.03
AT1G22870.1	Thale cress	cytosol	65.63	66.92
AT1G71410.1	Thale cress	cytosol	65.2	66.78
KRH36424	Soybean	cytosol	66.49	66.56
Bra016140.1-P	Field mustard	cytosol	57.36	65.68
CDY21396	Canola	cytosol	53.49	65.53
Solyc11g042990.1.1	Tomato	plastid	65.09	64.88
GSMUA_Achr3P25170_001	Banana	cytosol	63.16	63.64
Zm00001d044478_P022	Maize	cytosol	62.19	60.19
EES01072	Sorghum	cytosol	61.65	59.85
TraesCS3D01G231400.1	Wheat	cytosol	61.98	59.67
TraesCS3A01G221700.2	Wheat	cytosol	61.87	59.57
TraesCS3B01G251500.3	Wheat	cytosol	61.76	59.46
Os01t0616100-01	Rice	cytosol, plasma membrane	43.72	55.37
Zm00001d011351_P002	Maize	cytosol	60.04	54.27
HORVU3Hr1G054200.1	Barley	plastid	62.08	54.12
HORVU3Hr1G048750.1	Barley	mitochondrion	13.53	36.84
VIT_13s0067g03110.t01	Wine grape	mitochondrion	16.11	16.97

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.10.10	EntrezGene:100256813	wikigene:100256813	MapMan:18.4.17	InterPro:ARM-like
InterPro:ARM-type_fold	ProteinID:CBI17053	ProteinID:CBI17053.3	UniProt:D7SN24	EMBL:FN594956	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011989	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100256813	wikigene:LOC100256813
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR12984	PANTHER:PTHR12984:SF6	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF48371	SUPFAM:SSF56112	UniParc:UPI00019855CC	ArrayExpress:VIT_18s0089g00030	EnsemblPlantsGene:VIT_18s0089g00030	EnsemblPlants:VIT_18s0089g00030.t01
unigene:Vvi.4825	RefSeq:XP_002273755	RefSeq:XP_002273755.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:+:27682673..27701712

Molecular Weight (calculated)

101069.0 Da

IEP (calculated)

7.691

GRAVY (calculated)

-0.205

Length

931 amino acids

Sequence
(BLAST)

001: MALNMKTLTQ ALAKTAAVIE KTVQTTVQEV TGPKPLQDYE LLDQIGTAGP GLAWKLYSGK ARGGSAVSQQ YPTVCVWVLD KKALSEARTR AGLSRAAEES
101: FLDVIRADAG RLVRLRHPGV VHVVQALDEN KNAMAMVTEP LFASVANALG SLEGIGKVPK ELKGMEMGLL EVKHGLLQVS ETLEFLHNNA RLIHRAISPE
201: TVVITSSGAW KLSGFGFAIS SDQASGDLAN VPAFHYAEYD VEDSILPLQP ALNYTAPELV RSRGSPAGSA SDIFSFGCLA YHLIAHKPLF DCHNNVKMYT
301: NSLTYLTNEA FTSIPPELVP DLQRMLSTNE SFRPTALEFT GSPFFRDDTR LRALRFLDHM LERDNMQKSE FLKALSDMWK DFDSRVLRYK VLPPLCAELR
401: NLVMQPMILP MVLTIAESQD KNEFELYTLP ALVPVLSTAS GETLLLLVKH AELIINKTSH EHLVSHVLPL LVRAYDDNDA RIQEEVLRRS AFLAKQLDAQ
501: LVKQAILPRV HGLALKTTVA AVRVNALLCL SDLVSTLDKH AVLDVLQTVQ RCTAVDRSPP TLMCTLGIAN SILKQYGIEF AAEHVLPLLT PLLIAQQLNV
601: QQFAKYMLFV KDILRKIEEK RGVTLTDSGM PQVKTPSFSD GLQSEALKKV SGTVSSAAKS STSWDEDWGP TTKAPANSIQ PSTISISSTL PYPSNQPIEV
701: ASMQPRSSLT SASSQHTAST CPPVDIEWPP RASSGMTPKL GDAANQKPNT GSPSTSTFDD IDPFADWPPR PGGSLNVSGS SNNGIVASSN NKYGTTSRSG
801: AMNDVIFQTN SDMSWAFNTQ KLVEPSRQNQ GNSTFNSTSL NSGLNSQSSI GFMKQNQGIS TLGSYNDKKT TDLGSIFASS KNDHAAPRLA PPPPTAVGRG
901: RGRGRGNQGH SNARPAHAKS PSEQPPLLDL L

Best Arabidopsis Sequence Match ( AT1G22870.1 )
(BLAST)

001: MSINMRTLTQ ALAKTAAVIE KTVQTTVQEV TGPKPLQDYE LLDQIGSGGP GLAWKLYSAK ARDSTRPQQY PTVCVWVLDK RALSEARARA GLSKAAEDAF
101: LDLIRADSGK LVRLRHPGVV HVVQALDENK NAMAMVTEPL FASVANALGN VENVDNVPKD LKSMEMSLLE VKHGLLQIAE TLNFLHNNAH LIHRAVSPEN
201: VFITSAGSWK LAGFGFAISQ AQDGNLDNLQ SFHYSEYDVE DSILPLQPSL NYTAPELVRS KTSSAGVSSD IFSFGCLTYH LVARKPLFDC HNNVKMYMNT
301: LNYLTNETFS SIPSDLVSDL QRMLSMNESY RPTALDFTGS SFFRSDTRLR ALRFLDHMLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VMQPVILPMV LTIAESQDKN DFELTTLPAL VPVLSTATGD TLLLLIKRAE LIINKTNAEH LVSHVLPLLL RAYNDNDVRI QEEVLKRSTS VAKQLDGQVV
501: RQAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKLAV TEILQTIQRC TAVDRSAPTL MCTLAIANAI LKQYGVEFTS EHVLPLIIPL LTAQQLNVQQ
601: FAKYILFVKD ILRKIEEKRG VTVNDSGVPE VKPGCVADGL QFQTPTKKTE KVASAAKNSP AWDEDWALPT KISAPRDPGP ANSPQFNNST VQSQSSNRTS
701: VPTTCPAVDL EWPPRQSFNA TAQPANDETR INAAGTPTTP SFDELDPFAN WPPRPNSAST ASGGFHNSTT TQPPINNSGS GLRNNLTDGR QFQTTNNDFW
801: AFGNASLSSM KSQQETSGIR ASNADPLTSF GIQNQNQGMP SFGSSSYGNQ KPQADISSIF SSSRTEQSAM KLAPPPSIAV GRGRGRGRSG TSISKPNGSK
901: QQQTEQPSLL DLL

Arabidopsis Description

Kinase family with ARM repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I313]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.