CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96321	Canola	cytosol	93.98	94.41
CDY03692	Canola	cytosol	87.63	86.16
CDY37942	Canola	cytosol	86.83	85.0
AT1G71410.1	Thale cress	cytosol	87.17	84.49
CDY04777	Canola	cytosol	77.64	76.6
CDY21396	Canola	cytosol	63.68	73.82
VIT_18s0089g00030.t01	Wine grape	cytosol	67.54	63.91
CDY00940	Canola	cytosol	8.29	62.93
KRH27546	Soybean	extracellular	65.15	61.85
KRH36424	Soybean	cytosol	64.13	60.75
Solyc11g042990.1.1	Tomato	plastid	62.88	59.31
CDY00941	Canola	extracellular	4.99	45.83
CDY23884	Canola	cytosol, extracellular, plastid	3.75	20.75
CDY22472	Canola	cytosol	16.0	17.69
CDY35443	Canola	cytosol	16.0	17.69
CDX93162	Canola	cytosol	15.78	17.48
CDY06969	Canola	cytosol	15.66	17.4
CDY23885	Canola	cytosol	4.31	17.12
CDY04778	Canola	cytosol	2.04	1.83

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.10.10	MapMan:18.4.17	GO:A0A078C9D5	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDX72804	ProteinID:CDX72804	ProteinID:CDX72804.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00103193001	InterPro:HEAT_type_2	InterPro:IPR000719	InterPro:IPR011989	InterPro:IPR021133	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PFscan:PS50077	PANTHER:PTHR12984	PANTHER:PTHR12984:SF6	InterPro:Prot_kinase_dom
SUPFAM:SSF48371	SUPFAM:SSF56112	UniParc:UPI0004EDD638	SEG:seg	:	:

Description

BnaC06g32520D

Coordinates

chrLK031797:-:358843..363437

Molecular Weight (calculated)

96004.4 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.203

Length

881 amino acids

Sequence
(BLAST)

001: MSLNMKTFTQ ALARTAAVIE KTVQTTVQEV TGPKALQDYE LLDQIGSAGP GLAWKLYAAK ARDATRSQQY PTVCVWMLDK RALSESRVRA GLSKAAEDAF
101: LDLIRADAGK LVRLRHPGVV HVVQALDENK NAMALVTEPL FASVANALRN VENVANVPKD LKSMEMSLLE VKHGLLQISE TLNFLHNNAQ LIHRAISPEN
201: VLITSAGSWK LAGFGFAISA AHAGNLDNMQ SFHYSEYDVE DSMLPVQPSL NYTAPELVRS KSPSAGVSSD IFSFGCLAYH LVARKPLLDC NNNVKMYLNT
301: LNYITNESFS SKPSDLVSDL QRMLSMNEAY RPTALDFTGS SFFRTDARLR ALRFLDHMLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VLQPIILPMV LTIAQSQDRN DFELITLPAL VPVLSTASGD TLLLLVKHAE LITNKTDSEH LVSHVLPLLL RAYNDNDVRI QEEVLKKSTS VAKQLDGQVV
501: KEAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKPAV IEILQTVQCC TAVDRSAPTL MCTLAIANAI LKQYGVEFTA EHVLTLMMPL LTAQQLNVQQ
601: FAKYMLFVKD ILRKIEEKRG VTVSDSGVPE VKPHSAANGV QFQSSNQTPE KVASAAKSSP AWDEDWGSSS KDSAVANHAS SHQVTNNQFN KSSNQSQPLP
701: NKATAPTTCP PVDIEWPPRQ LSSLTAPPIA DETQLNTGTS STPGFDELDP FANWPPRTNN SASVASTGLN NGTVSGFSNN LTAGSPFQTA SNDNWAFSNA
801: SLSSLQPPQQ SQDQGVSSFS SGSNNNQKPA DISSIFSPNR TGQPAMKLTP PPWTAMGRGR GRGRGGTSKP NGSQTSLVDL L

Best Arabidopsis Sequence Match ( AT1G71410.1 )
(BLAST)

001: MSINMKTFTQ ALARTAAVIE KTVHTTVQEV TGPKALQDYE LLDQIGSAGP GLAWKLYAAK ARDSTRPQQY PTVCVWMLDK RALSEARVRA NLSKAAEDAF
101: LDLIRADAGK LVRLRHPGVV HVVQALDENK NAMALVTEPL FASVANALGN VENVGNVPKD LKSMEMSLLE VKHGLLQISE TLNFLHNNAN LIHRAISPEN
201: VLITSAGSWK LAGFGFAISA AQAGNLDNMQ SFHYSEYDVE DSILPVQPSL NYTAPELMRS KSPSAGASSD IFSFGCLAYH LVARKPLFDC NNNVKMYMNT
301: LNYITNESFS SIPSELVSDL QRMLSTNESF RPTALDFTGS NFFRSDARLR ALRFLDHLLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VLQPIILPMV LTIAQSQDRT DFELITLPAL VPVLSTASGD TLLLLVKHAD LITNKTDSEH LVSHVLPLLL RAYNDNDVRI QEEVLKRSTS VAKQLDGQVV
501: RQAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKPAA IEILETIQRC TAVDRSAPTL MCTLAVANAI LKQYGVEFTA EHVLTLMMPL LTAQQLNVQQ
601: FAKYMLFVKD ILRKIEEKRG VTVNDSGVPE VKPHSAANGL QFQSSTQIPE KVASAAKSSP AWDEDWGSPS KDSAVGNPAS SRHNTNDQFN KSTDQSQPSI
701: MSTLPNKTTA PTTCPAVDIE WPPRQSSSLT APATDNQTQL NTGTSFASGF DELDPFANWP PRPNNGASVA STGLKNGAAS NFSNNLPGGT HFQTANNDNW
801: AFSSASLSSL KPPQQGNQGI SANNQDPLNS FGVPKQSQGM PSFTSGSYNN QKPADISSIF GSSKTEPSAM KLAPPPSIAM GRGRGRGRGG TGTSTSKPSG
901: SQPSLLDLL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.