CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23884	Canola	cytosol, extracellular, plastid	10.42	6.29
CDY21396	Canola	cytosol	45.83	5.79
CDY03692	Canola	cytosol	47.92	5.13
CDX96321	Canola	cytosol	46.88	5.13
CDY37942	Canola	cytosol	47.92	5.11
CDX72804	Canola	cytosol	45.83	4.99
CDY04777	Canola	cytosol	45.83	4.93
Os01t0616100-01	Rice	cytosol, plasma membrane	33.33	4.35
CDY23885	Canola	cytosol	9.38	4.05
GSMUA_Achr3P25170_001	Banana	cytosol	37.5	3.9
EES01072	Sorghum	cytosol	36.46	3.65
Zm00001d044478_P022	Maize	cytosol	36.46	3.64
TraesCS3A01G221700.2	Wheat	cytosol	35.42	3.52
TraesCS3B01G251500.3	Wheat	cytosol	35.42	3.52
TraesCS3D01G231400.1	Wheat	cytosol	35.42	3.52
Zm00001d011351_P002	Maize	cytosol	34.38	3.2
HORVU3Hr1G054200.1	Barley	plastid	35.42	3.18
CDY06969	Canola	cytosol	18.75	2.27
CDX93162	Canola	cytosol	18.75	2.26
CDY22472	Canola	cytosol	18.75	2.26
CDY35443	Canola	cytosol	18.75	2.26
CDY04778	Canola	cytosol	0.0	0.0
Bra029841.1-P	Field mustard	cytosol	0.0	0.0
CDY00940	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00941	EnsemblPlantsGene:GSBRNA2T00110948001	Gene3D:1.10.510.10	GO:A0A078EIH2	InterPro:Kinase-like_dom_sf	PANTHER:PTHR12984
PANTHER:PTHR12984:SF6	ProteinID:CDY00941	ProteinID:CDY00941.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF56112
UniParc:UPI0004EEEDF0	MapMan:35.2	:	:	:	:

Description

BnaC05g42590D

Coordinates

chrLK031923:-:221604..222478

Molecular Weight (calculated)

10842.1 Da

IEP (calculated)

6.328

GRAVY (calculated)

0.194

Length

96 amino acids

Sequence
(BLAST)

1: MILLLVHRHH LLLLSELCFN PLSDHYSEYD VEDSIPLVQP SLCYTAPEFV RSKSPSAGAS SDSFSFGCIA YHLVARKPLL DCNNNVKMVT LNTLWF

Best Arabidopsis Sequence Match ( AT1G71410.1 )
(BLAST)

001: MSINMKTFTQ ALARTAAVIE KTVHTTVQEV TGPKALQDYE LLDQIGSAGP GLAWKLYAAK ARDSTRPQQY PTVCVWMLDK RALSEARVRA NLSKAAEDAF
101: LDLIRADAGK LVRLRHPGVV HVVQALDENK NAMALVTEPL FASVANALGN VENVGNVPKD LKSMEMSLLE VKHGLLQISE TLNFLHNNAN LIHRAISPEN
201: VLITSAGSWK LAGFGFAISA AQAGNLDNMQ SFHYSEYDVE DSILPVQPSL NYTAPELMRS KSPSAGASSD IFSFGCLAYH LVARKPLFDC NNNVKMYMNT
301: LNYITNESFS SIPSELVSDL QRMLSTNESF RPTALDFTGS NFFRSDARLR ALRFLDHLLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VLQPIILPMV LTIAQSQDRT DFELITLPAL VPVLSTASGD TLLLLVKHAD LITNKTDSEH LVSHVLPLLL RAYNDNDVRI QEEVLKRSTS VAKQLDGQVV
501: RQAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKPAA IEILETIQRC TAVDRSAPTL MCTLAVANAI LKQYGVEFTA EHVLTLMMPL LTAQQLNVQQ
601: FAKYMLFVKD ILRKIEEKRG VTVNDSGVPE VKPHSAANGL QFQSSTQIPE KVASAAKSSP AWDEDWGSPS KDSAVGNPAS SRHNTNDQFN KSTDQSQPSI
701: MSTLPNKTTA PTTCPAVDIE WPPRQSSSLT APATDNQTQL NTGTSFASGF DELDPFANWP PRPNNGASVA STGLKNGAAS NFSNNLPGGT HFQTANNDNW
801: AFSSASLSSL KPPQQGNQGI SANNQDPLNS FGVPKQSQGM PSFTSGSYNN QKPADISSIF GSSKTEPSAM KLAPPPSIAM GRGRGRGRGG TGTSTSKPSG
901: SQPSLLDLL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.