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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03692 Canola cytosol 88.12 89.4
Bra007977.1-P Field mustard cytosol 87.57 88.84
CDY37942 Canola cytosol 87.57 88.44
CDX96321 Canola cytosol 85.04 88.14
Bra016140.1-P Field mustard cytosol 78.0 87.21
CDX72804 Canola cytosol 84.49 87.17
AT1G22870.1 Thale cress cytosol 79.21 78.86
VIT_18s0089g00030.t01 Wine grape cytosol 66.78 65.2
KRH27546 Soybean extracellular 64.58 63.25
KRH36424 Soybean cytosol 63.26 61.83
Solyc11g042990.1.1 Tomato plastid 62.82 61.13
GSMUA_Achr3P25170_001 Banana cytosol 60.07 59.09
EES01072 Sorghum cytosol 60.4 57.25
Zm00001d044478_P022 Maize cytosol 60.51 57.17
TraesCS3D01G231400.1 Wheat cytosol 59.85 56.26
TraesCS3A01G221700.2 Wheat cytosol 59.74 56.15
TraesCS3B01G251500.3 Wheat cytosol 59.52 55.95
Os01t0616100-01 Rice cytosol, plasma membrane 42.13 52.11
HORVU3Hr1G054200.1 Barley plastid 60.4 51.4
Zm00001d011351_P002 Maize cytosol 56.77 50.1
HORVU3Hr1G048750.1 Barley mitochondrion 13.86 36.84
AT2G40730.1 Thale cress cytosol 15.95 18.17
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.10.10MapMan:18.4.17EntrezGene:843482ProteinID:AAG51833.1ProteinID:AEE35198.1
EMBL:AK221244ProteinID:ANM60464.1InterPro:ARM-likeInterPro:ARM-type_foldArrayExpress:AT1G71410EnsemblPlantsGene:AT1G71410
RefSeq:AT1G71410TAIR:AT1G71410RefSeq:AT1G71410-TAIR-GEnsemblPlants:AT1G71410.1TAIR:AT1G71410.1Unigene:At.27861
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0035619InterPro:IPR000719InterPro:IPR011989InterPro:Kinase-like_dom_sfRefSeq:NP_001322749.1RefSeq:NP_177297.1
PFAM:PF00069PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS50011PANTHER:PTHR12984
PANTHER:PTHR12984:SF6InterPro:Prot_kinase_domUniProt:Q9C9H8SUPFAM:SSF48371SUPFAM:SSF56112UniParc:UPI00000AB175
SEG:seg:::::
Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9H8]
Coordinates
chr1:-:26912726..26917727
Molecular Weight (calculated)
98769.6 Da
IEP (calculated)
7.445
GRAVY (calculated)
-0.224
Length
909 amino acids
Sequence
(BLAST)
001: MSINMKTFTQ ALARTAAVIE KTVHTTVQEV TGPKALQDYE LLDQIGSAGP GLAWKLYAAK ARDSTRPQQY PTVCVWMLDK RALSEARVRA NLSKAAEDAF
101: LDLIRADAGK LVRLRHPGVV HVVQALDENK NAMALVTEPL FASVANALGN VENVGNVPKD LKSMEMSLLE VKHGLLQISE TLNFLHNNAN LIHRAISPEN
201: VLITSAGSWK LAGFGFAISA AQAGNLDNMQ SFHYSEYDVE DSILPVQPSL NYTAPELMRS KSPSAGASSD IFSFGCLAYH LVARKPLFDC NNNVKMYMNT
301: LNYITNESFS SIPSELVSDL QRMLSTNESF RPTALDFTGS NFFRSDARLR ALRFLDHLLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VLQPIILPMV LTIAQSQDRT DFELITLPAL VPVLSTASGD TLLLLVKHAD LITNKTDSEH LVSHVLPLLL RAYNDNDVRI QEEVLKRSTS VAKQLDGQVV
501: RQAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKPAA IEILETIQRC TAVDRSAPTL MCTLAVANAI LKQYGVEFTA EHVLTLMMPL LTAQQLNVQQ
601: FAKYMLFVKD ILRKIEEKRG VTVNDSGVPE VKPHSAANGL QFQSSTQIPE KVASAAKSSP AWDEDWGSPS KDSAVGNPAS SRHNTNDQFN KSTDQSQPSI
701: MSTLPNKTTA PTTCPAVDIE WPPRQSSSLT APATDNQTQL NTGTSFASGF DELDPFANWP PRPNNGASVA STGLKNGAAS NFSNNLPGGT HFQTANNDNW
801: AFSSASLSSL KPPQQGNQGI SANNQDPLNS FGVPKQSQGM PSFTSGSYNN QKPADISSIF GSSKTEPSAM KLAPPPSIAM GRGRGRGRGG TGTSTSKPSG
901: SQPSLLDLL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.