Factsheet for PGSC0003DMT400042962

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030435	Potato	plastid	53.33	54.62
KRH34211	Soybean	cytosol	34.51	28.21
Solyc06g048890.2.1	Tomato	cytosol	64.31	19.9
Solyc05g052200.2.1	Tomato	nucleus	51.37	16.01
KRH40335	Soybean	cytosol	44.71	14.38
KRG92577	Soybean	cytosol	44.31	14.25
VIT_13s0067g03110.t01	Wine grape	mitochondrion	47.45	13.69
KRH00899	Soybean	cytosol	40.78	13.16
AT2G40730.1	Thale cress	cytosol	41.18	13.16
Bra000201.1-P	Field mustard	cytosol	40.0	12.8
Os01t0819900-01	Rice	cytosol, plasma membrane	41.18	12.73
TraesCS3D01G336800.1	Wheat	cytosol	40.0	12.38
EES03802	Sorghum	cytosol	39.61	12.26
TraesCS3B01G375000.1	Wheat	cytosol	39.61	12.26
Bra016976.1-P	Field mustard	cytosol	37.65	12.06
TraesCS3A01G342800.1	Wheat	cytosol	39.61	10.94
HORVU3Hr1G080820.2	Barley	cytosol, plastid	39.22	10.88
KRG88859	Soybean	cytosol, peroxisome, plastid	5.49	5.65
Zm00001d004670_P001	Maize	cytosol	3.53	2.88
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	0.78	1.8
CDY04778	Canola	cytosol	5.88	1.52
Zm00001d014830_P001	Maize	cytosol, peroxisome, plasma membrane	1.18	1.18
PGSC0003DMT400022642	Potato	cytosol	0.39	0.71

Protein Annotations

EnsemblPlants:PGSC0003DMT400042962	EnsemblPlantsGene:PGSC0003DMG400016657	PGSC:PGSC0003DMG400016657	SEG:seg	UniParc:UPI00029539B4	UniProt:M1BDV7
MapMan:35.2	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016657]

Coordinates

chr6:-:34311157..34315127

Molecular Weight (calculated)

26128.1 Da

IEP (calculated)

6.690

GRAVY (calculated)

-0.630

Length

255 amino acids

Sequence
(BLAST)

001: MGTSSIPGNA GLLGWAMSSL TLKGGKTSEQ NPNAPAISSV PLASAVSDAS ANHVVADSAS IKPVHISSGA DVADHPIPVS PASSDGWGEL ESGIHEGHDS
101: DKDGWDDINP QEEPKPSPSL ANIQAAQRRP VSQPKPQGTG LRGKTTPKMS KDNDEDLWGS VAVPAPRTTS QPSNSRANKT VDDDDPWAAI AAPAPSSKPL
201: NVKRSGALDD NDPWAAIAAP VPTSSARPSI GRGRGTKPAA PKLGAQRVNR TSSGM

Best Arabidopsis Sequence Match ( AT2G40730.1 )
(BLAST)

001: MFKFLKGVVA GSGTGLKDLP YNIGDPYPSA WGSWSHFRGT SKDDGSPVSI FALSGNNAQD GHLAAGRNGV KRLRTVRHPN ILSFLHSTEV ETHDGSTTKV
101: TIYIVTEPVM PLSDKIKELG LKATQRDEYF ALGLHQIGKA VSFLNNDCKL VHGNVCLASV VVTPTLDWKL HALDVLSEFD GSNESASGPM LPYEWLVGTQ
201: YKPMEMVKSD WVAIRKSPPW AIDSWGLGCL IYELFSGSKL AKTEELRNTV GIPKSLLPDY QRLLSSMPSR RLNTSKLLEN GEYFQNKLVD TIHFMDILNL
301: KDSVEKDTFF RKLPNVAEQL PREIVLKKLL PLLASSLEFG SAAAPALTAL LKMGSWLSTE DFSVKVLPTI VKLFASNDRA IRVSLLQHVD QFGESMSGQI
401: VDEQVYPHVA TGFADTSAFL RELTLKSMLV LAPKLSQRTL SGSLLKYLSK LQVDEEPAIR TNTTILLGNI ATYLNEGTRK RVLINAFTVR ALRDTFPPAR
501: GAGIVALCAT STTYDDTEIA TRILPNIVVL TIDQDSDVRS KAFQAVEQFL QILKQNYEKT NAGEIGASGG ASAIPETAGL IGWAMSSLTL KGKPLEQAPL
601: ASSSSAPSLA AAASNATSTA TEAPSVKASH HTRSNSDFTD QPAPPSPTST DGWGDAENGI SEGHESDKDG WDLEPLDEPK PSPALANIQA AQKRPVSQSS
701: RPSAATSSRP KISTVKAAAK TEDDDLWGSI AAPPPATTSR PLNVKKTVQS DDEDPWAAIA APPPTTRAKP LSSGRGRGAK PAALKLGAQR INRTSSGM

Arabidopsis Description

Kinase family with ARM repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4II29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.