Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014862_P002 | Maize | cytosol | 84.69 | 84.48 |
| Os06t0728600-00 | Rice | plasma membrane | 55.46 | 74.94 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 77.48 | 72.45 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 77.57 | 72.13 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 77.07 | 71.95 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 75.91 | 70.76 |
| KRH74100 | Soybean | cytosol | 6.04 | 54.89 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 35.02 | 46.48 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 38.0 | 42.78 |
| KRH14013 | Soybean | endoplasmic reticulum | 36.26 | 42.24 |
| Solyc02g082540.2.1 | Tomato | nucleus | 36.34 | 42.21 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 35.02 | 42.05 |
| CDX96625 | Canola | cytosol | 32.78 | 40.41 |
| KRH74101 | Soybean | endoplasmic reticulum | 28.56 | 40.21 |
| KRH60909 | Soybean | endoplasmic reticulum | 34.77 | 39.55 |
| CDY01356 | Canola | cytosol | 32.04 | 39.49 |
| CDY33644 | Canola | cytosol | 32.45 | 39.44 |
| CDY31869 | Canola | cytosol | 32.28 | 39.35 |
| CDY38814 | Canola | cytosol | 37.25 | 39.34 |
| KRH51589 | Soybean | endoplasmic reticulum | 35.02 | 39.31 |
| Bra012247.1-P | Field mustard | cytosol | 32.53 | 39.3 |
| CDY08192 | Canola | cytosol | 37.67 | 39.12 |
| CDY66337 | Canola | cytosol | 32.04 | 39.09 |
| CDY29508 | Canola | cytosol | 32.04 | 38.97 |
| AT1G20760.1 | Thale cress | cytosol | 32.86 | 38.96 |
| Bra025842.1-P | Field mustard | cytosol | 32.28 | 38.88 |
| CDY04654 | Canola | cytosol | 37.58 | 38.57 |
| CDY00394 | Canola | cytosol | 36.51 | 38.55 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.06 | 38.14 |
| Bra012288.1-P | Field mustard | cytosol | 35.43 | 37.78 |
| CDY01320 | Canola | cytosol | 36.84 | 37.68 |
| Bra016413.1-P | Field mustard | cytosol | 35.51 | 37.63 |
| CDX96582 | Canola | cytosol | 35.6 | 37.62 |
| AT1G21630.2 | Thale cress | cytosol | 38.41 | 37.21 |
| PGSC0003DMT400025666 | Potato | cytosol | 4.8 | 35.8 |
| Bra017933.1-P | Field mustard | cytosol | 35.18 | 34.47 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 32.12 | 34.19 |
| Zm00001d048338_P035 | Maize | cytosol | 29.14 | 32.44 |
| Zm00001d027503_P036 | Maize | cytosol | 28.48 | 32.42 |
| Solyc04g082560.2.1 | Tomato | cytosol | 32.53 | 32.0 |
| Zm00001d014526_P002 | Maize | cytosol | 8.2 | 18.1 |
| Zm00001d053858_P001 | Maize | cytosol, extracellular | 7.86 | 17.37 |
| Zm00001d001906_P004 | Maize | cytosol | 7.2 | 13.68 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | UniProt:A0A1D6LUR9 | ProteinID:AQK83064.1 | ncoils:Coil | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 | ScanProsite:PS00018 |
| PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI0008447FFE | EnsemblPlantsGene:Zm00001d037125 | EnsemblPlants:Zm00001d037125_P009 | EnsemblPlants:Zm00001d037125_T009 | SEG:seg |
Description
Calcium-binding EF hand family protein
Coordinates
chr6:-:113332551..113340615
Molecular Weight (calculated)
131075.0 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.707
Length
1208 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAFDAYFC AADLDRDGRI SGQEAVAFFK GSGLPQPVLA QIWTYADKNR TGFLGREDFC NSLKLVTVAQ SGRELTPDIV RSALFGPAAA KIPAPRINVS
0101: TAGPQTNSVA SPPNATRALG SGQQNPAVRG PQVLPGASSN PQVRPPQPPN ANTVPPVQGV ASRPPVGGGP SGLNHTSSTT TNLATDWFSG KRSASSLGAT
0201: SQAPTRGISP QGNLTTAGIS AQNSTPLPVY NSHMPGATTP ANANSTNVNM MPSQPSVSDS KTLVPLGNGL PSNSTFGVDP FSVTLQAKQE SALTPNVPNN
0301: LPSSTAPASA AGPHHPPKPM QAGPLQGISS LPSHTSQLPH SQPAPRQQQF NAIPSTPGPV GANIPGGQIP SNPYQSQAPW PKITQVDVRK YMIVFIKVDR
0401: DRDGKITGEE ARNLFLSWRL PRDILRKVWD LSDQDKDGML SFKEFCVAVY LMERHREHRP LPDVLPDGIW AEGTSLPSTG QFAGNPSGPP SHASTGFASR
0501: GMQGPHHGML PSSMKPTSRR PLPLDADDTV KAEQQKPKIP VLEEHLVGQL SKEEQGTLDA KFKEASDADK KVYWKVQELE KEIQDSREKT EFYRTKMQEL
0601: ILYKSRCENR LNEVSESMSA DKREVQSLAA KYDERCKKVG DVASKLTMDE ASFREIQEKK LEIYNAIVKL QKGDESDEKL QERANKIQSD LEELVKSLNE
0701: QCKRYGLRAK PTTLVELPFG WQTGIQETAA TWDEEWDRFG DEGFSIIKEL TVEVEPPVVP KSQPTVEDVK VSTNGASTEK EDNKFAKSTA AAAVEQAVEP
0801: EAIPSNSKLE STKSPPVSPV KNRDDGSTDE LDTKQSGPND VLPRATESVS NRGMDSSAHG DKTYDGHSWA PSFDHGTDND SLWNFGHKDG ENGDSDLFFG
0901: PQGLPPIRTG GSSSNSLFVK EQKPSFDSVP GTPMEKPFFD SIPGTPVQKS VFDYSVPSTP MQNSVFDYSI PSTPMQKPLF DSVPGTPVQK SVFDSVPSTP
1001: MQKSVFDSAP STPTQKPFFD SFPSTPMQRS MFDSGPSRAE SPTAGSVYGK EQKGFFDSSV PSTPMYNSNL TPRYSEAGDD SFDTMSQYSS FGMHDNNSFG
1101: QIDSFSRFDS FRSNADNGGN DAFARFDSFR STSDQGGGNS FMRYDSMNSS SDHDRTDTFA RFDSMKNSDF NNQGYSFDDD DPFGTGPFKS TETSNSPTRH
1201: GTDAWSAF
0101: TAGPQTNSVA SPPNATRALG SGQQNPAVRG PQVLPGASSN PQVRPPQPPN ANTVPPVQGV ASRPPVGGGP SGLNHTSSTT TNLATDWFSG KRSASSLGAT
0201: SQAPTRGISP QGNLTTAGIS AQNSTPLPVY NSHMPGATTP ANANSTNVNM MPSQPSVSDS KTLVPLGNGL PSNSTFGVDP FSVTLQAKQE SALTPNVPNN
0301: LPSSTAPASA AGPHHPPKPM QAGPLQGISS LPSHTSQLPH SQPAPRQQQF NAIPSTPGPV GANIPGGQIP SNPYQSQAPW PKITQVDVRK YMIVFIKVDR
0401: DRDGKITGEE ARNLFLSWRL PRDILRKVWD LSDQDKDGML SFKEFCVAVY LMERHREHRP LPDVLPDGIW AEGTSLPSTG QFAGNPSGPP SHASTGFASR
0501: GMQGPHHGML PSSMKPTSRR PLPLDADDTV KAEQQKPKIP VLEEHLVGQL SKEEQGTLDA KFKEASDADK KVYWKVQELE KEIQDSREKT EFYRTKMQEL
0601: ILYKSRCENR LNEVSESMSA DKREVQSLAA KYDERCKKVG DVASKLTMDE ASFREIQEKK LEIYNAIVKL QKGDESDEKL QERANKIQSD LEELVKSLNE
0701: QCKRYGLRAK PTTLVELPFG WQTGIQETAA TWDEEWDRFG DEGFSIIKEL TVEVEPPVVP KSQPTVEDVK VSTNGASTEK EDNKFAKSTA AAAVEQAVEP
0801: EAIPSNSKLE STKSPPVSPV KNRDDGSTDE LDTKQSGPND VLPRATESVS NRGMDSSAHG DKTYDGHSWA PSFDHGTDND SLWNFGHKDG ENGDSDLFFG
0901: PQGLPPIRTG GSSSNSLFVK EQKPSFDSVP GTPMEKPFFD SIPGTPVQKS VFDYSVPSTP MQNSVFDYSI PSTPMQKPLF DSVPGTPVQK SVFDSVPSTP
1001: MQKSVFDSAP STPTQKPFFD SFPSTPMQRS MFDSGPSRAE SPTAGSVYGK EQKGFFDSSV PSTPMYNSNL TPRYSEAGDD SFDTMSQYSS FGMHDNNSFG
1101: QIDSFSRFDS FRSNADNGGN DAFARFDSFR STSDQGGGNS FMRYDSMNSS SDHDRTDTFA RFDSMKNSDF NNQGYSFDDD DPFGTGPFKS TETSNSPTRH
1201: GTDAWSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.