Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14013 | Soybean | endoplasmic reticulum | 62.86 | 55.16 |
| KRH74101 | Soybean | endoplasmic reticulum | 50.99 | 54.08 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 57.69 | 52.19 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 54.07 | 45.85 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 47.8 | 45.69 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 47.14 | 45.3 |
| Solyc02g082540.2.1 | Tomato | nucleus | 50.99 | 44.62 |
| Os06t0728600-00 | Rice | plasma membrane | 41.65 | 42.39 |
| CDY00394 | Canola | cytosol | 52.75 | 41.96 |
| CDY38814 | Canola | cytosol | 52.42 | 41.7 |
| EER92924 | Sorghum | cytosol | 47.58 | 41.44 |
| CDY08192 | Canola | cytosol | 52.53 | 41.1 |
| CDY01320 | Canola | cytosol | 53.3 | 41.07 |
| CDX96582 | Canola | cytosol | 51.54 | 41.03 |
| Os03t0130500-01 | Rice | plasma membrane | 48.13 | 41.01 |
| Bra016413.1-P | Field mustard | cytosol | 51.21 | 40.88 |
| Bra012288.1-P | Field mustard | cytosol | 50.88 | 40.87 |
| CDY04654 | Canola | cytosol | 52.64 | 40.7 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 47.36 | 39.58 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 46.7 | 39.46 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 46.92 | 39.39 |
| AT1G21630.2 | Thale cress | cytosol | 52.97 | 38.65 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 47.47 | 38.2 |
| Bra017933.1-P | Field mustard | cytosol | 50.22 | 37.06 |
| Zm00001d048338_P035 | Maize | cytosol | 43.63 | 36.59 |
| Zm00001d027503_P036 | Maize | cytosol | 42.64 | 36.57 |
| Zm00001d014862_P002 | Maize | cytosol | 46.92 | 35.26 |
| Zm00001d037125_P009 | Maize | cytosol | 46.48 | 35.02 |
| EER89004 | Sorghum | cytosol | 47.03 | 34.91 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 47.47 | 33.44 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 47.69 | 33.41 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 47.36 | 33.31 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 45.82 | 32.18 |
| VIT_19s0090g01130.t01 | Wine grape | cytosol | 11.98 | 20.0 |
| VIT_00s0516g00020.t01 | Wine grape | cytosol | 11.54 | 19.09 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | ProteinID:CCB60531 | ProteinID:CCB60531.1 | ncoils:Coil | InterPro:EF-hand-dom_pair |
| InterPro:EF_hand_dom | InterPro:EH_dom | UniProt:F6I0R5 | EMBL:FN596508 | GO:GO:0000166 | GO:GO:0002943 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0017150 | GO:GO:0050660 |
| GO:GO:0055114 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 | PFscan:PS50031 |
| PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000210A7DD | ArrayExpress:VIT_03s0038g03870 | EnsemblPlantsGene:VIT_03s0038g03870 | EnsemblPlants:VIT_03s0038g03870.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr3:+:2833989..2847120
Molecular Weight (calculated)
100473.0 Da
IEP (calculated)
4.906
GRAVY (calculated)
-0.656
Length
910 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAQNQAPN VDLFDAYFRR ADLDRDGRIS GSEAVAFFQT TNLPKHVLAQ IWTYADHNRI GFLGRAEFYN ALKLVTVAQS KRELTPDIVK AALYGPAAAK
101: IPAPQINLAA APTQMNTAAP APAPAPASVA PMGSQYFPPQ GNQLMRPTQT LPVPIRGVSP SMSQDGFGVS PSGLTASVPS KPQVSSGITS LEPAAKNSKA
201: MDVTGNGFAS ESIFGGDVFS ASPSQLKQDS SVHTSSSGNA PISSSIAPNT ASSQSQLPWP RITQSDIQKY TKVFVAVDTD RDGKITGEQA RNLFLSWRLP
301: REVLKQVWDL SDQDNDSMLS LREFCTALYL MERYRDGRPL PAVLPSSIFA DFPTTVQPMA GYGSAAWRPP SGLQQQQGMP VSGARHVTPA MGGRPPLPHR
401: ADEGKQTNQQ KSKVPVLEKH FVNQLSKEEQ DMLNTKFREA ADANKKVEEL EKEILDSKEK IEFCRTKMQE LVLYKSRCDN RLNEIIERVA ADKREAEALA
501: KKYEEKYKQS GDVASKLTIE EATFRDIQER KMELYQAILK MEENGSADES IQVRADRIQS DLDELVKALN ERCKKYGLYV KPTTLVELPF GWQLGIQEGA
601: ADWDEDWDKF EEEGYVFVKE LTLDVQNAIA PPKPKSMPVD KEKASTAETP TAASSSVDVK SEDPPSMGER VVENGSAYSQ TEDYSARSPG STARPAFDSP
701: SREFLDSHFF KPFSEDASPH AKDTQSDYGG ADSFLSGDKS FDEPTWGKFD TNDDMESIWG MNSIGATSKM DHERHTENYF FGDEFDLKPI RTESSQASGS
801: FPKKSTFTFD DSVPSTPLYS ISNSPSRFNE GSEHSFDPFS RFDSFKSHDS GFFQPRETLA RFDSMRSTAD YDHGHGFPSS DDSDPFGTGP FKTSLDSQTP
901: RRGSDNWSAF
101: IPAPQINLAA APTQMNTAAP APAPAPASVA PMGSQYFPPQ GNQLMRPTQT LPVPIRGVSP SMSQDGFGVS PSGLTASVPS KPQVSSGITS LEPAAKNSKA
201: MDVTGNGFAS ESIFGGDVFS ASPSQLKQDS SVHTSSSGNA PISSSIAPNT ASSQSQLPWP RITQSDIQKY TKVFVAVDTD RDGKITGEQA RNLFLSWRLP
301: REVLKQVWDL SDQDNDSMLS LREFCTALYL MERYRDGRPL PAVLPSSIFA DFPTTVQPMA GYGSAAWRPP SGLQQQQGMP VSGARHVTPA MGGRPPLPHR
401: ADEGKQTNQQ KSKVPVLEKH FVNQLSKEEQ DMLNTKFREA ADANKKVEEL EKEILDSKEK IEFCRTKMQE LVLYKSRCDN RLNEIIERVA ADKREAEALA
501: KKYEEKYKQS GDVASKLTIE EATFRDIQER KMELYQAILK MEENGSADES IQVRADRIQS DLDELVKALN ERCKKYGLYV KPTTLVELPF GWQLGIQEGA
601: ADWDEDWDKF EEEGYVFVKE LTLDVQNAIA PPKPKSMPVD KEKASTAETP TAASSSVDVK SEDPPSMGER VVENGSAYSQ TEDYSARSPG STARPAFDSP
701: SREFLDSHFF KPFSEDASPH AKDTQSDYGG ADSFLSGDKS FDEPTWGKFD TNDDMESIWG MNSIGATSKM DHERHTENYF FGDEFDLKPI RTESSQASGS
801: FPKKSTFTFD DSVPSTPLYS ISNSPSRFNE GSEHSFDPFS RFDSFKSHDS GFFQPRETLA RFDSMRSTAD YDHGHGFPSS DDSDPFGTGP FKTSLDSQTP
901: RRGSDNWSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.