Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96582 | Canola | cytosol | 89.34 | 89.41 |
| CDY00394 | Canola | cytosol | 83.65 | 83.65 |
| CDY08192 | Canola | cytosol | 84.09 | 82.72 |
| CDY01320 | Canola | cytosol | 85.14 | 82.47 |
| CDY04654 | Canola | cytosol | 84.27 | 81.9 |
| AT1G21630.2 | Thale cress | cytosol | 84.27 | 77.31 |
| KRH74100 | Soybean | cytosol | 7.87 | 67.67 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 41.7 | 52.42 |
| Solyc02g082540.2.1 | Tomato | nucleus | 42.22 | 46.44 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 39.42 | 42.03 |
| CDY29508 | Canola | cytosol | 35.66 | 41.09 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 34.18 | 41.07 |
| CDY66337 | Canola | cytosol | 35.31 | 40.81 |
| CDY31869 | Canola | cytosol | 35.14 | 40.57 |
| CDX96625 | Canola | cytosol | 34.7 | 40.51 |
| CDY01356 | Canola | cytosol | 34.62 | 40.41 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 32.95 | 39.81 |
| CDY33644 | Canola | cytosol | 34.44 | 39.64 |
| Os06t0728600-00 | Rice | plasma membrane | 29.98 | 38.37 |
| Os03t0130500-01 | Rice | plasma membrane | 34.79 | 37.27 |
| Zm00001d037125_P009 | Maize | cytosol | 39.34 | 37.25 |
| Zm00001d014862_P002 | Maize | cytosol | 39.34 | 37.16 |
| EER89004 | Sorghum | cytosol | 39.6 | 36.95 |
| EER92924 | Sorghum | cytosol | 33.39 | 36.55 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 33.74 | 35.84 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 40.3 | 35.68 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 33.92 | 35.63 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 33.74 | 35.61 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 40.12 | 35.47 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 40.12 | 35.33 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 33.83 | 34.22 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 38.64 | 34.1 |
| Zm00001d027503_P036 | Maize | cytosol | 29.98 | 32.33 |
| Zm00001d048338_P035 | Maize | cytosol | 29.98 | 31.61 |
| CDY25408 | Canola | cytosol | 9.62 | 20.95 |
| CDY29816 | Canola | cytosol | 9.62 | 20.91 |
| CDY50093 | Canola | cytosol | 9.44 | 20.34 |
| CDX94536 | Canola | cytosol | 9.27 | 19.38 |
| CDY16689 | Canola | cytosol | 9.18 | 19.23 |
| CDY50090 | Canola | cytosol | 9.44 | 18.95 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | GO:A0A078HN61 | UniProt:A0A078HN61 | EnsemblPlants:CDY38814 | ProteinID:CDY38814 |
| ProteinID:CDY38814.1 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00066630001 | InterPro:IPR000261 | InterPro:IPR002048 |
| PFAM:PF12763 | PFAM:PF13202 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 |
| SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE289C | SEG:seg | : |
Description
BnaC08g19880DBnaC08g19880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN61]
Coordinates
chrLK032433:+:106447..112376
Molecular Weight (calculated)
124142.0 Da
IEP (calculated)
5.104
GRAVY (calculated)
-0.709
Length
1144 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAARPAASQ DLFDAYFRRA DLDGDGRISG AEAVAFFQGS NLPKNVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPEIVKA AVYSPASANI
0101: PAPKINLAAT PSPQPRGVVP ATQAQGGASL PSVPAGMRGP QMGGTVSTSN QQVVPGQQNQ FTGPSSSQPQ QNFQSQGMPA GGTSAPRPAT QPMPSDWLSG
0201: RSAGPSGQVN SQIPSNQSGY GLTAPNSVAN NIPKPHMTTA VISSTTARPQ ESAPVHKPQD SSAHSGARAL DAPSSQLAAS GNGFPSDSLF GDVFTVASSQ
0301: PKQQSAGTMS MGISPSSGTT GSTVGVGLAA SSQSQAPLPR MTPAAVQKYA KVFVQVDTDR DGKITGHQAR NLFLSWKLPR EALKQVWDLS DQDNDSMLSL
0401: REFCIAVYLM ERYREGRPLP PVFPSTIISS ESMFTSPSQS VAPQGNASWG HTHGQVHGAP RPPAIPKGKP PRPVPLSPSD GMVQSTQPKR KMPELEKHLV
0501: DQLSKEEQDS LNSKFEEATA IDKKALSYFG KLRIVFKFFL NLIEPTHYNL CDILVDDLEK EIADSKQKIE FFHAKMQELV LYKSRCDNRY NEITERVSGD
0601: KRELESLAKK YEEKYKKSGN VGSKLTIEEA TFRDIQEKKM ELYQAIVKFE EGKLDDSIVK ERTEHIQSGL EELIKNLNER CKQYGVRGKP TSLVELPFGW
0701: QPGIQEGAAD WDEDWDKLEE EGFTFAKELT MDVQNVIAPP KEKSSTWKKE VTASSNEGEN LTSSDVESKK EKNASTREEA SEHSDGKADR NGSLDDSDVR
0801: KGVEADGSPG TKDTTSENGH DDGESTASAG KTINEPSYDS HDETDDHGKD KKHDSDFGFG FGFDDFSIKP IKTGSTLSND FLPPKLSIFS DSVPSPPANA
0901: NDGFTAKPSL FADSVPSTPA TTTASYSGQK SYFDESVPST PAYAGKSFFD DSVPSTPAYP GNLFPEKKSF FDDSVPSTPA YSTSDFGGKP FASETPRSDN
1001: LFPGRSPFMF DSVPSTPAAH DDFSSNSFSR FDSFNSNNNN DAFSLSRSDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DNNNASETPK ASLTRFDSIG
1101: STRDSDYSHG YGFDDHDPFG STGLFKTTTS TAETPRSTDH WNAF
0101: PAPKINLAAT PSPQPRGVVP ATQAQGGASL PSVPAGMRGP QMGGTVSTSN QQVVPGQQNQ FTGPSSSQPQ QNFQSQGMPA GGTSAPRPAT QPMPSDWLSG
0201: RSAGPSGQVN SQIPSNQSGY GLTAPNSVAN NIPKPHMTTA VISSTTARPQ ESAPVHKPQD SSAHSGARAL DAPSSQLAAS GNGFPSDSLF GDVFTVASSQ
0301: PKQQSAGTMS MGISPSSGTT GSTVGVGLAA SSQSQAPLPR MTPAAVQKYA KVFVQVDTDR DGKITGHQAR NLFLSWKLPR EALKQVWDLS DQDNDSMLSL
0401: REFCIAVYLM ERYREGRPLP PVFPSTIISS ESMFTSPSQS VAPQGNASWG HTHGQVHGAP RPPAIPKGKP PRPVPLSPSD GMVQSTQPKR KMPELEKHLV
0501: DQLSKEEQDS LNSKFEEATA IDKKALSYFG KLRIVFKFFL NLIEPTHYNL CDILVDDLEK EIADSKQKIE FFHAKMQELV LYKSRCDNRY NEITERVSGD
0601: KRELESLAKK YEEKYKKSGN VGSKLTIEEA TFRDIQEKKM ELYQAIVKFE EGKLDDSIVK ERTEHIQSGL EELIKNLNER CKQYGVRGKP TSLVELPFGW
0701: QPGIQEGAAD WDEDWDKLEE EGFTFAKELT MDVQNVIAPP KEKSSTWKKE VTASSNEGEN LTSSDVESKK EKNASTREEA SEHSDGKADR NGSLDDSDVR
0801: KGVEADGSPG TKDTTSENGH DDGESTASAG KTINEPSYDS HDETDDHGKD KKHDSDFGFG FGFDDFSIKP IKTGSTLSND FLPPKLSIFS DSVPSPPANA
0901: NDGFTAKPSL FADSVPSTPA TTTASYSGQK SYFDESVPST PAYAGKSFFD DSVPSTPAYP GNLFPEKKSF FDDSVPSTPA YSTSDFGGKP FASETPRSDN
1001: LFPGRSPFMF DSVPSTPAAH DDFSSNSFSR FDSFNSNNNN DAFSLSRSDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DNNNASETPK ASLTRFDSIG
1101: STRDSDYSHG YGFDDHDPFG STGLFKTTTS TAETPRSTDH WNAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.