Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012288.1-P | Field mustard | cytosol | 93.4 | 97.35 |
| CDY00394 | Canola | cytosol | 92.55 | 95.54 |
| CDY38814 | Canola | cytosol | 82.47 | 85.14 |
| CDY08192 | Canola | cytosol | 82.73 | 84.01 |
| CDY04654 | Canola | cytosol | 83.07 | 83.35 |
| CDX96582 | Canola | cytosol | 80.44 | 83.11 |
| AT1G21630.2 | Thale cress | cytosol | 84.25 | 79.79 |
| KRH74100 | Soybean | cytosol | 7.2 | 63.91 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 41.07 | 53.3 |
| Solyc02g082540.2.1 | Tomato | nucleus | 40.73 | 46.25 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 33.62 | 41.7 |
| CDY31869 | Canola | cytosol | 34.97 | 41.68 |
| CDY29508 | Canola | cytosol | 34.97 | 41.59 |
| CDY66337 | Canola | cytosol | 34.63 | 41.31 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 37.51 | 41.29 |
| CDY01356 | Canola | cytosol | 34.21 | 41.22 |
| CDX96625 | Canola | cytosol | 34.12 | 41.12 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 32.43 | 40.44 |
| CDY33644 | Canola | cytosol | 33.95 | 40.34 |
| Os06t0728600-00 | Rice | plasma membrane | 29.21 | 38.59 |
| Os03t0130500-01 | Rice | plasma membrane | 34.21 | 37.83 |
| EER92924 | Sorghum | cytosol | 32.94 | 37.22 |
| Zm00001d014862_P002 | Maize | cytosol | 38.1 | 37.16 |
| EER89004 | Sorghum | cytosol | 38.44 | 37.03 |
| Zm00001d037125_P009 | Maize | cytosol | 37.68 | 36.84 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 33.28 | 36.49 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 33.45 | 36.27 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 33.28 | 36.25 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 38.7 | 35.37 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 38.61 | 35.24 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 38.36 | 34.87 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 33.11 | 34.57 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 37.26 | 33.95 |
| Zm00001d027503_P036 | Maize | cytosol | 29.3 | 32.61 |
| Zm00001d048338_P035 | Maize | cytosol | 29.47 | 32.07 |
| CDY25408 | Canola | cytosol | 9.4 | 21.14 |
| CDY29816 | Canola | cytosol | 9.4 | 21.1 |
| CDY50093 | Canola | cytosol | 9.14 | 20.34 |
| CDX94536 | Canola | cytosol | 8.89 | 19.2 |
| CDY50090 | Canola | cytosol | 9.14 | 18.95 |
| CDY16689 | Canola | cytosol | 8.72 | 18.86 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | GO:A0A078EGU9 | EnsemblPlants:CDY01320 | ProteinID:CDY01320 | ProteinID:CDY01320.1 |
| ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00112271001 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 |
| PFAM:PF13202 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE1C87 | SEG:seg | : | : |
Description
BnaA07g10930D
Coordinates
chrLK031926:-:177076..182936
Molecular Weight (calculated)
128021.0 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.690
Length
1181 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPRPTGSQ DLFDTYFRRA DLDGDGRISG AEAVAFFQAS NLPKNVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVVP ATQAQGATSM PSSVAAGMRG GQMGGTVSTS NQQVVPGQQN QFNGPRPAQP PQNFQSQGMP AGGAGAPRTA PNSVANHIPT
0201: PHMTPAVISS TTARPQESAP VHKPQDSSAP SGARALDVPS SQLVGKNPKE LAASGNGFAS DSLFGDVFAV GSTEPKQPTT GTTSTVAISS VSSGTVVAPR
0301: VAQSIVRQSS IPQHGSLGQH PVGVQNQLAG QISQPFAPSG AASGTTGSTP RPRPHSHSQA PWPKMTPADV QKYTKVFVQV DTDRDGKITG NQARNLFFSW
0401: KLPQEALKQV WDLSDQDNDS MLSLREFCIA VYLMERYREG RPLPPVFPST IISSESMFTS PGQSVAPHGN ASWGHPHGAQ HHQLHGGSRP PAIPKGKPPR
0501: PVPLSPSDGM VQPTQPKRKM PELEKHLVDQ LSKEEQDSLN SKFEEATAID KKALSGFSLI CFLICQCGKI YVTALSFLKI LVDELEKEIA DSKQKIEFFH
0601: AKMQELVLYK SRCDNRYNEI TERVSGDKRE LESLAKKYEE KYKKSGNVGS KLTIEEATFR DIQEKKMELY QAIVKFEEGK LDDGVVKERT EHIQSGLEEL
0701: IRNLNERCKQ YGVRGKPTTL VELPFGWQPG IQEGSADWDE EWDKLEEEGF VFVKELTLDV QNVIAPPKEK SSAWKKEITA SSNEGEDISS SDVESKTEKK
0801: PSSDEEASEK DPASADGKND RNGSLDDPDA RKGIEADDSP RTKDTRSENG HDDGESTASA GKTVNYDSHD ETDSVSSFNG KDKDHEKHDS GFGFGFGFDD
0901: FSIKPIKTGS TLSNDFLPPK LSIFSDSVPS PSANANDGFT AKPSLFADSV PSTPATTTAS YSGNKSYFDD SVPSTPAYAG KSFFDDSVPS TPAYPGNMFP
1001: EKKSFFDDSV PSTPAYSTSD FGGKPFASET PRSDNLFPGR SPFMFDSVPS TPAAQDDFSS NTFSRFDSFN SNNNDAFSLS RSDSMRSTSE PDPFASRFDS
1101: FNYQRYDSFN AQSYDSSSNN YVAETPKASL TRFDSIGSTR DADYSHGFGF DDHDPFGSTG PFKTTTNTAE TPRSSDHWNA F
0101: PAPKINLAAT PSPQPRGVVP ATQAQGATSM PSSVAAGMRG GQMGGTVSTS NQQVVPGQQN QFNGPRPAQP PQNFQSQGMP AGGAGAPRTA PNSVANHIPT
0201: PHMTPAVISS TTARPQESAP VHKPQDSSAP SGARALDVPS SQLVGKNPKE LAASGNGFAS DSLFGDVFAV GSTEPKQPTT GTTSTVAISS VSSGTVVAPR
0301: VAQSIVRQSS IPQHGSLGQH PVGVQNQLAG QISQPFAPSG AASGTTGSTP RPRPHSHSQA PWPKMTPADV QKYTKVFVQV DTDRDGKITG NQARNLFFSW
0401: KLPQEALKQV WDLSDQDNDS MLSLREFCIA VYLMERYREG RPLPPVFPST IISSESMFTS PGQSVAPHGN ASWGHPHGAQ HHQLHGGSRP PAIPKGKPPR
0501: PVPLSPSDGM VQPTQPKRKM PELEKHLVDQ LSKEEQDSLN SKFEEATAID KKALSGFSLI CFLICQCGKI YVTALSFLKI LVDELEKEIA DSKQKIEFFH
0601: AKMQELVLYK SRCDNRYNEI TERVSGDKRE LESLAKKYEE KYKKSGNVGS KLTIEEATFR DIQEKKMELY QAIVKFEEGK LDDGVVKERT EHIQSGLEEL
0701: IRNLNERCKQ YGVRGKPTTL VELPFGWQPG IQEGSADWDE EWDKLEEEGF VFVKELTLDV QNVIAPPKEK SSAWKKEITA SSNEGEDISS SDVESKTEKK
0801: PSSDEEASEK DPASADGKND RNGSLDDPDA RKGIEADDSP RTKDTRSENG HDDGESTASA GKTVNYDSHD ETDSVSSFNG KDKDHEKHDS GFGFGFGFDD
0901: FSIKPIKTGS TLSNDFLPPK LSIFSDSVPS PSANANDGFT AKPSLFADSV PSTPATTTAS YSGNKSYFDD SVPSTPAYAG KSFFDDSVPS TPAYPGNMFP
1001: EKKSFFDDSV PSTPAYSTSD FGGKPFASET PRSDNLFPGR SPFMFDSVPS TPAAQDDFSS NTFSRFDSFN SNNNDAFSLS RSDSMRSTSE PDPFASRFDS
1101: FNYQRYDSFN AQSYDSSSNN YVAETPKASL TRFDSIGSTR DADYSHGFGF DDHDPFGSTG PFKTTTNTAE TPRSSDHWNA F
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.