Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92924 | Sorghum | cytosol | 79.96 | 81.72 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 80.71 | 79.16 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 80.34 | 79.15 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 79.78 | 79.11 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 79.96 | 75.51 |
| Zm00001d027503_P036 | Maize | cytosol | 68.91 | 69.37 |
| Zm00001d048338_P035 | Maize | cytosol | 70.41 | 69.31 |
| KRH74100 | Soybean | cytosol | 6.84 | 54.89 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 41.01 | 48.13 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 42.7 | 47.9 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 42.32 | 47.73 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 43.54 | 46.22 |
| KRH60909 | Soybean | endoplasmic reticulum | 43.73 | 43.97 |
| CDX96625 | Canola | cytosol | 40.26 | 43.88 |
| Bra012247.1-P | Field mustard | cytosol | 41.01 | 43.8 |
| CDY31869 | Canola | cytosol | 40.64 | 43.79 |
| CDY01356 | Canola | cytosol | 40.07 | 43.67 |
| Bra025842.1-P | Field mustard | cytosol | 40.92 | 43.57 |
| AT1G20760.1 | Thale cress | cytosol | 41.39 | 43.38 |
| KRH51589 | Soybean | endoplasmic reticulum | 43.54 | 43.22 |
| CDY29508 | Canola | cytosol | 40.07 | 43.1 |
| CDY33644 | Canola | cytosol | 40.07 | 43.06 |
| CDY66337 | Canola | cytosol | 39.79 | 42.93 |
| KRH14013 | Soybean | endoplasmic reticulum | 41.01 | 42.24 |
| KRH74101 | Soybean | endoplasmic reticulum | 32.4 | 40.33 |
| Os06t0728600-00 | Rice | plasma membrane | 32.58 | 38.93 |
| PGSC0003DMT400025666 | Potato | cytosol | 5.9 | 38.89 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 39.51 | 37.18 |
| Solyc02g082540.2.1 | Tomato | nucleus | 35.96 | 36.92 |
| CDY00394 | Canola | cytosol | 37.83 | 35.31 |
| Solyc04g082560.2.1 | Tomato | cytosol | 40.45 | 35.18 |
| CDY08192 | Canola | cytosol | 38.11 | 35.0 |
| Bra012288.1-P | Field mustard | cytosol | 37.08 | 34.95 |
| CDY38814 | Canola | cytosol | 37.27 | 34.79 |
| CDY04654 | Canola | cytosol | 38.2 | 34.66 |
| CDX96582 | Canola | cytosol | 36.89 | 34.47 |
| Bra016413.1-P | Field mustard | cytosol | 36.7 | 34.39 |
| CDY01320 | Canola | cytosol | 37.83 | 34.21 |
| AT1G21630.2 | Thale cress | cytosol | 38.86 | 33.28 |
| Bra017933.1-P | Field mustard | cytosol | 36.98 | 32.04 |
| Solyc02g082530.1.1 | Tomato | nucleus | 2.15 | 23.71 |
| Os06t0687900-01 | Rice | cytosol | 2.43 | 21.67 |
| Os06t0687800-01 | Rice | plasma membrane | 10.21 | 20.04 |
| Os02t0158100-01 | Rice | cytosol | 10.11 | 19.89 |
| Os04t0669300-01 | Rice | plasma membrane | 9.46 | 18.63 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | EntrezGene:4331503 | ProteinID:ABF93800.1 | ProteinID:BAF10769.1 | ProteinID:BAS82127.1 |
| ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | EnsemblPlantsGene:Os03g0130500 |
| EnsemblPlants:Os03t0130500-01 | PFAM:PF12763 | PFAM:PF13202 | ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 |
| PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | UniProt:Q10S92 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0000DB4C14 | RefSeq:XP_015631695.1 | SEG:seg | : | : | : |
Description
EF hand domain containing protein. (Os03t0130500-01);Similar to ESTs AU031435(E61570). (Os03t0130500-02)
Coordinates
chr3:-:1720158..1727907
Molecular Weight (calculated)
113636.0 Da
IEP (calculated)
5.676
GRAVY (calculated)
-0.639
Length
1068 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGMEAFEAY FRRADLNQDG RISGQEAVAF FQGANLPQQV LAQVWMHADK NKTGFLGRPE FFNALRLVTV AQSGRQLTPD IVQSALYGPA AARIPAPKIA
0101: GGGQAPPQMA AAGAPRPQVN AAVSPAPGQA GAPQPQMNVA GAPRPQGSGM MPGSAQIGGS QQVNAGAVPR PQGVNSMMPA ASQGGALQPT QFATQRGMQS
0201: QPPSMGFNQQ PPPSSTGFMR PTQPGAPAAS LQGQGPGINQ VPLGGGSMGA PAGWRGGNVG SVGGLPQATP GATAPQQATP GGFGLTLSST MGMAPGQQAQ
0301: GTPPSSMPPQ SNSAVSAQDS KALVLSGNGS ASGLGASNDI FSALTQPKSN VSTLSFPTSM APNSSSFMST PSGSQNLSNL AQFGSQQGIP TVSSGGSQPQ
0401: QTHPITKPSV PAPTVSGVSA GVSNSASQWP KVTQSDIQKY TKVFADVDRD RDGKITGAEA RTLFLSWRLP REILKQVWDL SDQDNDGMLS LREFCIALYL
0501: MERHRAGTPL PPALPDSLKY DEVLLRATGL PSTAYNGPSW QQNQGLPHKG PGAAGMPATG VRQPLPPHLQ AQMDGANRPG QPRPHMPGMD NHAAPQANKD
0601: DGSGANSAVQ EDAPKKVEVE KQVLDSREKL EYYRTKMQDL VLYKSRCDNR LNEITERASS DKREVESLAK KYEEKYKQVA ELASKLAVEE HAFRDVQERK
0701: VELHDALVKM VQGGSVDGLL QVRADRIQYQ LEEMEKAFSE RCKHFGLQFK PSASVELPFG WEPGKQEGAI EWDEDWDKFE DEGFGFVKDN GTIVENPVAS
0801: ENVKVPSLWN DMDESPVASS NGHIKAERHY RAGDHAAESD LGYDFGEESV RSPSSAGRSA SGSPFVSSNF AMHDSSPSKK ETYSDHGGSE SIFGDKYADE
0901: TSWNFDDQDT ESVWGSNAMN NESDHHGSAH NSFFGSDDFG VNPVRVGSPS GASTYGKKKS SFFDDSVPSS PAYTSGFSPK FSESRDDSSS YNLGRFDSFR
1001: SQESGFFPQE SRFSRFDSIN NSKGENVTGF DSPKSSTNFG RFDSFDDADP FGSSGPFKAS GSRSPPKF
0101: GGGQAPPQMA AAGAPRPQVN AAVSPAPGQA GAPQPQMNVA GAPRPQGSGM MPGSAQIGGS QQVNAGAVPR PQGVNSMMPA ASQGGALQPT QFATQRGMQS
0201: QPPSMGFNQQ PPPSSTGFMR PTQPGAPAAS LQGQGPGINQ VPLGGGSMGA PAGWRGGNVG SVGGLPQATP GATAPQQATP GGFGLTLSST MGMAPGQQAQ
0301: GTPPSSMPPQ SNSAVSAQDS KALVLSGNGS ASGLGASNDI FSALTQPKSN VSTLSFPTSM APNSSSFMST PSGSQNLSNL AQFGSQQGIP TVSSGGSQPQ
0401: QTHPITKPSV PAPTVSGVSA GVSNSASQWP KVTQSDIQKY TKVFADVDRD RDGKITGAEA RTLFLSWRLP REILKQVWDL SDQDNDGMLS LREFCIALYL
0501: MERHRAGTPL PPALPDSLKY DEVLLRATGL PSTAYNGPSW QQNQGLPHKG PGAAGMPATG VRQPLPPHLQ AQMDGANRPG QPRPHMPGMD NHAAPQANKD
0601: DGSGANSAVQ EDAPKKVEVE KQVLDSREKL EYYRTKMQDL VLYKSRCDNR LNEITERASS DKREVESLAK KYEEKYKQVA ELASKLAVEE HAFRDVQERK
0701: VELHDALVKM VQGGSVDGLL QVRADRIQYQ LEEMEKAFSE RCKHFGLQFK PSASVELPFG WEPGKQEGAI EWDEDWDKFE DEGFGFVKDN GTIVENPVAS
0801: ENVKVPSLWN DMDESPVASS NGHIKAERHY RAGDHAAESD LGYDFGEESV RSPSSAGRSA SGSPFVSSNF AMHDSSPSKK ETYSDHGGSE SIFGDKYADE
0901: TSWNFDDQDT ESVWGSNAMN NESDHHGSAH NSFFGSDDFG VNPVRVGSPS GASTYGKKKS SFFDDSVPSS PAYTSGFSPK FSESRDDSSS YNLGRFDSFR
1001: SQESGFFPQE SRFSRFDSIN NSKGENVTGF DSPKSSTNFG RFDSFDDADP FGSSGPFKAS GSRSPPKF
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.