Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74101 | Soybean | endoplasmic reticulum | 78.3 | 94.64 |
| KRH74100 | Soybean | cytosol | 11.76 | 91.73 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 55.16 | 62.86 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 43.39 | 47.27 |
| Solyc02g082540.2.1 | Tomato | nucleus | 46.67 | 46.54 |
| KRH60909 | Soybean | endoplasmic reticulum | 46.87 | 45.76 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 41.66 | 45.62 |
| Os06t0728600-00 | Rice | plasma membrane | 38.09 | 44.18 |
| KRH51589 | Soybean | endoplasmic reticulum | 45.81 | 44.15 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 45.52 | 43.99 |
| EER92924 | Sorghum | cytosol | 41.66 | 41.34 |
| Os03t0130500-01 | Rice | plasma membrane | 42.24 | 41.01 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 41.56 | 39.58 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 41.08 | 39.3 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 40.69 | 39.18 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 41.37 | 37.93 |
| Zm00001d027503_P036 | Maize | cytosol | 38.09 | 37.23 |
| Zm00001d048338_P035 | Maize | cytosol | 38.48 | 36.77 |
| EER89004 | Sorghum | cytosol | 43.39 | 36.7 |
| Zm00001d037125_P009 | Maize | cytosol | 42.24 | 36.26 |
| Zm00001d014862_P002 | Maize | cytosol | 42.33 | 36.25 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 43.01 | 34.33 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 42.72 | 34.29 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 42.53 | 34.08 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 41.27 | 33.02 |
| KRH45544 | Soybean | cytosol | 5.3 | 23.5 |
| KRH73798 | Soybean | cytosol | 11.19 | 21.13 |
| KRH11510 | Soybean | cytosol | 10.61 | 20.41 |
| KRH36524 | Soybean | cytosol | 10.61 | 20.41 |
| KRH51151 | Soybean | cytosol | 10.61 | 20.18 |
| KRH02006 | Soybean | cytosol | 10.41 | 19.82 |
| KRG98685 | Soybean | cytosol | 10.13 | 19.41 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100794495 | MapMan:22.1.4.7 | EMBL:ACUP02008488 | ncoils:Coil | InterPro:EF-hand-dom_pair |
| InterPro:EF_hand_dom | InterPro:EH_dom | EnsemblPlantsGene:GLYMA_14G001200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005515 | UniProt:I1M635 | InterPro:IPR000261 | InterPro:IPR002048 | EnsemblPlants:KRH14013 | ProteinID:KRH14013 |
| ProteinID:KRH14013.1 | PFAM:PF12763 | PFAM:PF13202 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 |
| PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000233BB39 | SEG:seg |
Description
hypothetical protein
Coordinates
chr14:-:128478..141428
Molecular Weight (calculated)
113027.0 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.671
Length
1037 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASAAPNVDL FDAYFRRADL DRDGRISGAE AVSFFQGSGL PKHVLAQIWA FANQSQSGFL GRAEFYNALK LVTVAQSKRE LTPEMVKAAL YGPAASKIPA
0101: PQINFSATVS APAPAPAPAP VPQIGPVSPL SHQNLGPRGA VPNLSGNQQT LPSQGNQFAR PPATVATQGM ARPETPGISS YGKMGGTPEV TSSPVAVRGT
0201: SPPSAQEGFG FGSNVARPPG QYPASPIKSS DQLVKDSKPV DASVNGDSSD SFFGGDLFSA SSFQPKQASS PQGFSSGTSA LSSAIVPVSG GNQHSTRTST
0301: PDSLQRSLAT QPVGAQLQQA QPVVKQDQHA SVQTHNKPNS SGLPGRLQDS ASSQSQAPWP RMTQTDVQKY MKVFMEVDTD RDGKITGEQA RNLFLSWRLP
0401: REVLKQVWDL SDQDNDSMLS LREFCIALYL MERHREGRVL PAVLPSNIVL DLPTTGQPAA HYSSWGNPSA FQQQPGTTGS GARQVNPAAG RPPRPAAVSQ
0501: SDEGPQNKPQ KSRIPVLEKH LINQLSSDEQ NSINSKFQEA TEADKKVEEL EKEIMESREK IEFYRAKMQE LVLYKSRCDN RLNEVIERIA ADKHEVEILA
0601: KKYEDKYKQV GDLSSKLTTE EATFRDIQEK KIELYQAIVK MEQDGKGDAT LQAHVDRIQT DLDELVKSLN ERCKKYGLRA KPTTLLELPF GWQPGIQEGA
0701: ADWDEDWDKL EDKEFVFVKE LTLDVQNIIV PPKQKLPSAV NTKAVNVEAV NTEAVNVEAV NTEAVNTDSP TFVASPKSDD KSEKPRTTNE QGVGNGSVYN
0801: KSEDGSVKSA PNSPFASSAI GSPHGDFDSD IRKTAGEDSS LRDQDTIQET QSDHGGVKSV FSGDKIFDEP NWGTFDTNDD IDSVWGFNAS SFTKEERDLD
0901: RAGNNYFFDS GELGLNPIKT GSPQAGDFFQ RSSGFGFDDS VPSTPLYSSS SSPQRPKEWL ETAFDFSRFD SFRTHDSVSL PARETTEQYD SVRNSVDFDH
1001: AYGFPAFDDS DPFGSGPFRT SSDNQTPRRG SDNWSAF
0101: PQINFSATVS APAPAPAPAP VPQIGPVSPL SHQNLGPRGA VPNLSGNQQT LPSQGNQFAR PPATVATQGM ARPETPGISS YGKMGGTPEV TSSPVAVRGT
0201: SPPSAQEGFG FGSNVARPPG QYPASPIKSS DQLVKDSKPV DASVNGDSSD SFFGGDLFSA SSFQPKQASS PQGFSSGTSA LSSAIVPVSG GNQHSTRTST
0301: PDSLQRSLAT QPVGAQLQQA QPVVKQDQHA SVQTHNKPNS SGLPGRLQDS ASSQSQAPWP RMTQTDVQKY MKVFMEVDTD RDGKITGEQA RNLFLSWRLP
0401: REVLKQVWDL SDQDNDSMLS LREFCIALYL MERHREGRVL PAVLPSNIVL DLPTTGQPAA HYSSWGNPSA FQQQPGTTGS GARQVNPAAG RPPRPAAVSQ
0501: SDEGPQNKPQ KSRIPVLEKH LINQLSSDEQ NSINSKFQEA TEADKKVEEL EKEIMESREK IEFYRAKMQE LVLYKSRCDN RLNEVIERIA ADKHEVEILA
0601: KKYEDKYKQV GDLSSKLTTE EATFRDIQEK KIELYQAIVK MEQDGKGDAT LQAHVDRIQT DLDELVKSLN ERCKKYGLRA KPTTLLELPF GWQPGIQEGA
0701: ADWDEDWDKL EDKEFVFVKE LTLDVQNIIV PPKQKLPSAV NTKAVNVEAV NTEAVNVEAV NTEAVNTDSP TFVASPKSDD KSEKPRTTNE QGVGNGSVYN
0801: KSEDGSVKSA PNSPFASSAI GSPHGDFDSD IRKTAGEDSS LRDQDTIQET QSDHGGVKSV FSGDKIFDEP NWGTFDTNDD IDSVWGFNAS SFTKEERDLD
0901: RAGNNYFFDS GELGLNPIKT GSPQAGDFFQ RSSGFGFDDS VPSTPLYSSS SSPQRPKEWL ETAFDFSRFD SFRTHDSVSL PARETTEQYD SVRNSVDFDH
1001: AYGFPAFDDS DPFGSGPFRT SSDNQTPRRG SDNWSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.