Factsheet for PGSC0003DMT400044120

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012193	Potato	endoplasmic reticulum	85.77	46.93
PGSC0003DMT400012194	Potato	plastid	84.27	16.42
PGSC0003DMT400049084	Potato	cytosol	2.62	9.72
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	10.11	5.18
Bra020679.1-P	Field mustard	cytosol	4.49	5.02
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	9.36	4.8
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	9.36	4.8
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	8.99	4.58
PGSC0003DMT400012185	Potato	cytosol	9.74	4.42
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	8.24	4.2
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	8.24	4.18
CDY21265	Canola	cytosol	4.49	3.76
Os08t0547900-01	Rice	plasma membrane	5.24	3.69
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	2.25	3.09
Bra033755.1-P	Field mustard	extracellular, plasma membrane	5.24	3.06
VIT_05s0094g01180.t01	Wine grape	cytosol	4.12	2.97
Bra029445.1-P	Field mustard	endoplasmic reticulum	5.62	2.91
CDY70590	Canola	endoplasmic reticulum, extracellular	5.24	2.85
VIT_00s0555g00020.t01	Wine grape	golgi	5.62	2.83
CDY49024	Canola	cytosol, endoplasmic reticulum, nucleus	5.24	2.82
Os01t0700500-01	Rice	cytosol	4.49	2.82
CDX86715	Canola	endoplasmic reticulum	5.24	2.71
CDX94508	Canola	endoplasmic reticulum, plasma membrane	5.24	2.71
CDY65737	Canola	extracellular, plasma membrane	5.24	2.7
CDX97347	Canola	endoplasmic reticulum, plasma membrane	4.87	2.52
CDY04419	Canola	endoplasmic reticulum, plasma membrane	4.87	2.52
AT4G12320.1	Thale cress	endoplasmic reticulum	4.87	2.51
AT5G44620.1	Thale cress	golgi	4.87	2.5
CDY21266	Canola	endoplasmic reticulum	4.87	2.45
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	4.87	2.4
KRH04015	Soybean	endoplasmic reticulum, extracellular	4.49	2.35
Zm00001d039698_P002	Maize	endoplasmic reticulum	4.49	2.34
Bra018471.1-P	Field mustard	endoplasmic reticulum, plasma membrane	4.49	2.33
CDX90825	Canola	endoplasmic reticulum	4.49	2.33
TraesCS7D01G271600.2	Wheat	plastid	5.24	2.32
KRH04014	Soybean	endoplasmic reticulum	4.49	2.32
EES14120	Sorghum	endoplasmic reticulum	4.49	2.27
TraesCS7B01G169500.1	Wheat	plastid	4.87	2.15
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	4.87	2.15
CDX90826	Canola	endoplasmic reticulum	4.12	2.13
Zm00001d032035_P001	Maize	endoplasmic reticulum	4.12	2.12
AT4G12330.1	Thale cress	endoplasmic reticulum	4.12	2.12
Bra000768.1-P	Field mustard	endoplasmic reticulum, extracellular	3.75	1.98
HORVU7Hr1G057280.2	Barley	mitochondrion	4.49	1.98
CDX82959	Canola	cytosol	3.75	1.95
CDX79171	Canola	cytosol	3.75	1.95
CDY64317	Canola	cytosol	3.75	1.95
PGSC0003DMT400044122	Potato	extracellular	3.75	1.94
Bra000769.1-P	Field mustard	endoplasmic reticulum	3.75	1.94
AT4G12310.1	Thale cress	endoplasmic reticulum, plasma membrane	3.75	1.92
Bra013634.1-P	Field mustard	endoplasmic reticulum	3.75	1.91
CDY42189	Canola	endoplasmic reticulum	3.75	1.91
Bra019366.1-P	Field mustard	endoplasmic reticulum	3.75	1.9
AT4G12300.1	Thale cress	endoplasmic reticulum	3.37	1.74
AT4G22710.1	Thale cress	endoplasmic reticulum	3.37	1.71
AT4G22690.1	Thale cress	plastid	3.37	1.62
CDY33945	Canola	cytosol	1.12	1.61
PGSC0003DMT400010109	Potato	endoplasmic reticulum	3.0	1.55
Bra020836.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	2.62	1.41
CDX94112	Canola	cytosol, endoplasmic reticulum	1.12	0.68
CDX76357	Canola	endoplasmic reticulum, plasma membrane, plastid	1.12	0.67
Bra020678.1-P	Field mustard	endoplasmic reticulum, plasma membrane	0.0	0.0
PGSC0003DMT400072105	Potato	mitochondrion	0.0	0.0
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	0.0	0.0
KRH57291	Soybean	cytosol	0.0	0.0
VIT_00s0555g00010.t01	Wine grape	cytosol	0.0	0.0
VIT_05s0094g01170.t01	Wine grape	cytosol	0.0	0.0
CDY72661	Canola	endoplasmic reticulum, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1BFM5	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400017123	PGSC:PGSC0003DMG400017123	EnsemblPlants:PGSC0003DMT400044120
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF114	SUPFAM:SSF48264
UniParc:UPI0002966CC9	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400017123]

Coordinates

chr00:+:36397144..36399272

Molecular Weight (calculated)

30740.4 Da

IEP (calculated)

5.676

GRAVY (calculated)

-0.235

Length

267 amino acids

Sequence
(BLAST)

001: MKVLAKRFDE IFESMIDQRQ KLDRNGVGQE SNDFLQVLLK LKDEADATMP LTMTEIKALL MDMILGGTDT TANTVEFAMA EIMHKPNVLR KLQQEVDTVV
101: GKDNIMEESH IQQLQYLYAV MKEVLRIHST APFLVPHCPS ETCTVGGYTV PKGSRVFINV WAIHRDPSIW ENPTEFRPER FLDNKWDYSG NDFNYFPFGS
201: GRRMCPGIVM AERMFMYSVA SLIHSFDWKF PEGETLDLTE KFGVILKKKM PLVAIPTPRL FNPTLYE

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.