Factsheet for PGSC0003DMT400072097

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 5
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g083510.1.1	Tomato	endoplasmic reticulum, plasma membrane	90.79	90.79
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	88.68	88.68
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	24.38	86.39
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	86.37	86.37
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	86.18	85.69
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	84.64	84.16
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	83.88	83.08
PGSC0003DMT400072105	Potato	mitochondrion	32.25	81.95
PGSC0003DMT400012185	Potato	cytosol	78.12	69.22
Zm00001d032035_P001	Maize	endoplasmic reticulum	50.86	51.16
Os01t0700500-01	Rice	cytosol	40.88	50.0
EES14120	Sorghum	endoplasmic reticulum	50.67	49.91
Os08t0547900-01	Rice	plasma membrane	36.28	49.87
Zm00001d039698_P002	Maize	endoplasmic reticulum	46.64	47.46
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	47.98	46.13
PGSC0003DMT400010109	Potato	endoplasmic reticulum	43.57	43.91
HORVU7Hr1G057280.2	Barley	mitochondrion	51.06	43.89
PGSC0003DMT400044122	Potato	extracellular	43.38	43.88
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	50.48	43.54
TraesCS7D01G271600.2	Wheat	plastid	50.29	43.45
TraesCS7B01G169500.1	Wheat	plastid	50.29	43.38
PGSC0003DMT400012193	Potato	endoplasmic reticulum	36.47	38.93
PGSC0003DMT400049084	Potato	cytosol	5.18	37.5
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	12.67	34.02
PGSC0003DMT400012194	Potato	plastid	80.42	30.58
PGSC0003DMT400044120	Potato	cytosol	4.8	9.36

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102595788	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1CPP6	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG401028052	PGSC:PGSC0003DMG401028052
EnsemblPlants:PGSC0003DMT400072097	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF114
SUPFAM:SSF48264	UniParc:UPI0002951A01	RefSeq:XP_006355530.1	SEG:seg	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG401028052]

Coordinates

chr8:+:52936411..52938209

Molecular Weight (calculated)

59183.5 Da

IEP (calculated)

8.680

GRAVY (calculated)

-0.051

Length

521 amino acids

Sequence
(BLAST)

001: MSLKFFKLLF DSFPWLLEQL NVEQKGVFFF CFLGFLALLW CFISNSNKGL PPGPKALPLI GNLHSLDPEL HTYFASLSQT YGPICRLWLG KKLGIIITSP
101: ALAREILKDK DTIFANRDVP AAGREFSYGG NNLLWAPYGP KWRMLRKVCV CDMLSCSTLD SVYALRQREL RQSISYFYNK AGSPVNVGEQ MFLTILNVIT
201: SMLWGGTVKG EERASLGAEF RHVVTEMSAL CSIPNLSDYY PGLAWFDFQG VTKKMKVLVK RFDKLFDSMI DQRQKLDRNG VGQESKDFLQ VLLKLKDESD
301: AKMPLTMIEL KALLMDMIIG GTDSTSNTIE FAMAEIMNKP DVLRKLQQEL EAVVGKDNIV DESHVKQLPY LYAVMKEVLR IHPTAPVLVP HCPSETCTVG
401: GYTVPKGSCI FINVWAIHRD PSIWKNPTEF RPKRFLDNKW DYSGNDFNYF PFGSGRRICA GIAMAERMFM YSLASLIHSF DWKLPEGETL EVTEKFGIIM
501: KKKMPLVAIP TPRLSNPKLY E

Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)

001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL

Arabidopsis Description

CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.