Factsheet for PGSC0003DMT400072105

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	62.44	87.07
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	84.88	33.4
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	83.41	32.51
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	81.95	32.25
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	81.95	32.25
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	81.46	31.87
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	81.46	31.87
Os08t0547900-01	Rice	plasma membrane	58.05	31.4
PGSC0003DMT400012185	Potato	cytosol	80.0	27.89
Os01t0700500-01	Rice	cytosol	55.61	26.76
Zm00001d032035_P001	Maize	endoplasmic reticulum	59.02	23.36
PGSC0003DMT400044122	Potato	extracellular	58.05	23.11
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	60.49	22.88
EES14120	Sorghum	endoplasmic reticulum	59.02	22.87
Zm00001d039698_P002	Maize	endoplasmic reticulum	56.1	22.46
PGSC0003DMT400010109	Potato	endoplasmic reticulum	56.1	22.24
HORVU7Hr1G057280.2	Barley	mitochondrion	61.46	20.79
TraesCS7D01G271600.2	Wheat	plastid	60.49	20.56
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	60.49	20.53
TraesCS7B01G169500.1	Wheat	plastid	60.49	20.53
PGSC0003DMT400012194	Potato	plastid	82.93	12.41
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	3.41	3.61
PGSC0003DMT400049084	Potato	cytosol	0.98	2.78
PGSC0003DMT400044120	Potato	cytosol	0.0	0.0
PGSC0003DMT400012193	Potato	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102595133	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1CPQ1	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400028054	PGSC:PGSC0003DMG400028054
EnsemblPlants:PGSC0003DMT400072105	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF114
SUPFAM:SSF48264	UniParc:UPI0002957FE0	RefSeq:XP_015167905.1	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400028054]

Coordinates

chr8:+:52915917..52917014

Molecular Weight (calculated)

23066.0 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.085

Length

205 amino acids

Sequence
(BLAST)

001: MVVGGTGSTA NTIEFAISEI LRNPDILRKL QQELATVVGK DNIVEESHIQ ELPYLYAVMK EVLRMHPAAP LLVPHCPSET CTVGGYIVPK GSCVFINVWA
101: IHRDASTWKN PTEFLPERFL QKNWDYGGND LNYFPFGSGR RICAGIDMAE RMFMYSLASL IHSFDWKLPE GETLDLTEKF GISLKKKMPL VAIPTPRLSN
201: STLYE

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.