Factsheet for PGSC0003DMT400049084

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	62.5	23.2
VIT_05s0094g01220.t01	Wine grape	cytosol	38.89	12.17
PGSC0003DMT400044122	Potato	extracellular	77.78	10.87
PGSC0003DMT400010109	Potato	endoplasmic reticulum	66.67	9.28
VIT_00s1682g00020.t01	Wine grape	cytosol	40.28	7.69
Os08t0547900-01	Rice	plasma membrane	38.89	7.39
Os01t0700500-01	Rice	cytosol	40.28	6.81
Zm00001d039698_P002	Maize	endoplasmic reticulum	44.44	6.25
Zm00001d032035_P001	Maize	endoplasmic reticulum	41.67	5.79
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	41.67	5.73
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	41.67	5.54
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	40.28	5.51
TraesCS7D01G271600.2	Wheat	plastid	45.83	5.47
TraesCS7B01G169500.1	Wheat	plastid	45.83	5.46
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	45.83	5.46
HORVU7Hr1G057280.2	Barley	mitochondrion	45.83	5.45
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	38.89	5.37
PGSC0003DMT400012193	Potato	endoplasmic reticulum	36.11	5.33
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	37.5	5.18
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	37.5	5.18
EES14120	Sorghum	endoplasmic reticulum	37.5	5.1
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	36.11	4.96
PGSC0003DMT400012185	Potato	cytosol	40.28	4.93
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	34.72	4.71
PGSC0003DMT400044120	Potato	cytosol	9.72	2.62
PGSC0003DMT400012194	Potato	plastid	44.44	2.34
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	2.78	1.36
PGSC0003DMT400072105	Potato	mitochondrion	2.78	0.98
VIT_05s0094g01190.t01	Wine grape	cytosol	2.78	0.78
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400049084	EnsemblPlantsGene:PGSC0003DMG400019080	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	PANTHER:PTHR24298
PANTHER:PTHR24298:SF312	PGSC:PGSC0003DMG400019080	UniParc:UPI000296C7C3	UniProt:M1BN81	MapMan:35.2	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400019080]

Coordinates

chr8:+:53027315..53027995

Molecular Weight (calculated)

8387.4 Da

IEP (calculated)

5.837

GRAVY (calculated)

-0.346

Length

72 amino acids

Sequence
(BLAST)

1: MEKHSKDGTE FRELVMKYGQ VMGKPNISDF FPMLARFDLQ GIQKEMEALL KLFDSILDPA ISECMKMLSD RR

Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)

001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL

Arabidopsis Description

CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.