Factsheet for PGSC0003DMT400044122

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

extracellular: 24773703

msms PMID: 24773703 doi

T Bengtsson, D Weighill, E Proux-Wéra, F Levander, S Resjö, DD Burra, LI Moushib, PE Hedley, E Liljeroth, D Jacobson, E Alexandersson, E Andreasson

Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Box 102, SE-230 53 Alnarp, Sweden. erik.alexandersson@slu.se.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010109	Potato	endoplasmic reticulum	85.44	85.11
PGSC0003DMT400049084	Potato	cytosol	10.87	77.78
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	28.16	74.74
VIT_05s0094g01190.t01	Wine grape	cytosol	30.87	62.35
PGSC0003DMT400072105	Potato	mitochondrion	23.11	58.05
VIT_00s1682g00020.t01	Wine grape	cytosol	40.78	55.7
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	15.53	54.42
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	16.5	50.0
VIT_05s0094g01220.t01	Wine grape	cytosol	21.75	48.7
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	49.71	48.21
Os01t0700500-01	Rice	cytosol	38.84	46.95
Zm00001d039698_P002	Maize	endoplasmic reticulum	45.24	45.51
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	45.63	44.85
Os08t0547900-01	Rice	plasma membrane	32.62	44.33
EES14120	Sorghum	endoplasmic reticulum	45.44	44.23
Zm00001d032035_P001	Maize	endoplasmic reticulum	44.47	44.21
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	44.85	44.08
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	44.47	43.95
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	44.85	43.92
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	44.08	43.57
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	43.88	43.38
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	45.44	43.17
PGSC0003DMT400012185	Potato	cytosol	44.47	38.95
HORVU7Hr1G057280.2	Barley	mitochondrion	44.47	37.79
TraesCS7B01G169500.1	Wheat	plastid	44.08	37.58
TraesCS7D01G271600.2	Wheat	plastid	43.88	37.48
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	43.88	37.42
PGSC0003DMT400012193	Potato	endoplasmic reticulum	18.64	19.67
PGSC0003DMT400012194	Potato	plastid	49.32	18.54
PGSC0003DMT400044120	Potato	cytosol	1.94	3.75

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102582638	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1BFM7
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400017124	PGSC:PGSC0003DMG400017124	EnsemblPlants:PGSC0003DMT400044122	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000294C237
RefSeq:XP_006367995.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400017124]

Coordinates

chr00:+:36399910..36403120

Molecular Weight (calculated)

58389.9 Da

IEP (calculated)

7.946

GRAVY (calculated)

-0.056

Length

515 amino acids

Sequence
(BLAST)

001: MEPLNELCLA ALTLSIVFLT ILWYKLTSHK EEPKLPPGPR GLPIVGFLPF LRTNLHHQLT ELSQQYGPIY KFWLGSKLCV VLNSPSLAKE VVRDQDSVFA
101: NRDPPIAGLV GTYGGLDIGF SPYGSYWRDM RKVFVREMLS NKNLEACYSL RRHEVRKTIR NVHTKIGNPV DIGELAFVTE MNVVISIIFG SKFVEETEKR
201: SKDGTEFREL VMKYGQVVGK PNISDFFPML ARFDLQGIKK EMEALLKLVD SILDPAISEC MKMLSDRREG EIQRNEKKHL IQILLELMEQ KDIGISLDLV
301: KIKAILVDIV IGGTDTTITT VEWVMSELLN NPEIMSKVQQ ELKHVVGMNN IVEESHLPNL HYLDAVLKET LRLHPALPLL LPKRPSQSAI VGGYKIPEGT
401: KVFLNVYAIH RGPQVWESPL EFQPERFLSP STNLDYAGNN MKYLPFGSGR RICAGIPLAE KMLMFILGSL LHSFDWKLPE GEIVDLSEGF GLVLKKSERL
501: LVIPTPRLPN FKLYQ

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.